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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 04:10:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: 3.
OU015357.1:2846017-2846036
AATGTCAACCCCTCCTTAAAGCCTCCTCTT2846017TCTCCTCCTTTGGTCCCTTTCTACTTCCATCATCTGTACACTTCCCATAT
Acomys dimidiatus genome assembly, chromosome: 3.
OU015376.1:2857841-2857860
AATGTCAACCCCTCCTTAAAGCCTCCTCTT2857841TCTCCTCCTTTGGTCCCTTTCTACTTCCATCATCTGTACACTTCCCATAT
602296962F1 NIH_MGC_87 Homo sapiens cDNA clone IMAGE:4391558 5', mRNA sequence.
BG029743.1:704-723
TTTGCCTGCGTTTCAAGGGTATAAGCAAAA704TCTCCTCCTTTGGTCCCTTTTACATTTCGGTGGCTGACATTAAGGTGGAC
CCCC21075.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC21075 3', mRNA sequence.
GR856728.1:380-399
TCTCTCTCATTATTATTCCAACCTGAAGTT380TCTCCTCCTTTGGTCCCTTTTGGTTTTTGAGCACTACATGTTTCTTCTAT
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:5458234-5458253
CTCTCATTATTATTCCAACTACCTGAAGTT5458234TCTCCTCCTTTGGTCCCTTTTGGTTTTGGAGCACTACATGTTTCTTCTAT
Glycine max cultivar Williams 82 chromosome 13.
CP126438.1:13712224-13712243
TCTCTCTCATTATTATTCCAACCTGAAGTT13712224TCTCCTCCTTTGGTCCCTTTTGGTTTTTGAGCACTACATGTTTCTTCTAT
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10334016-10334035
CATCCTTTTGCACGGTGGTTATTTCTGTTA10334016TCTCCTCCTTTGGTCCCTTTTTCTTCTTGATTACCCGTCTAGTTGTTTTG
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10334955-10334974
CATCCTTTTGCACGGTGGTTATTTCTGTTA10334955TCTCCTCCTTTGGTCCCTTTTTCTTCTTGATTACCCGTCTAGTTGTTTTG
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10335894-10335913
CATCCTTTTGCACGGTGGTTATTTCTGTTA10335894TCTCCTCCTTTGGTCCCTTTTTCTTCTTGATTACCCGTCTAGTTGTTTTG
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10336833-10336852
CATCCTTTTGCACGGTGGTTATTTCTGTTA10336833TCTCCTCCTTTGGTCCCTTTTTCTTCTTGATTACCCGTCTAGTTGTTTTG
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10337772-10337791
CATCCTTTTGCACGGTGGTTATTTCTGTTA10337772TCTCCTCCTTTGGTCCCTTTTTCTTCTTGATTACCCGTCTAGTTGTTTTG
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10338711-10338730
CATCCTTTTGCACGGTGGTTATTTCTGTTA10338711TCTCCTCCTTTGGTCCCTTTTTCTTCTTAATTACCCGTCTAGTTGTTTTG
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10339650-10339669
CATCCTTTTGCACGGTGGTTATTTCTGTTA10339650TCTCCTCCTTTGGTCCCTTTTTCTTCTTGATTACCCGTCTAGTTGTTTTG
Notodonta dromedarius genome assembly, chromosome: Z.
LR990160.1:10340589-10340608
CATCCTTTTGCACGGTGGTTATTTCTGTTA10340589TCTCCTCCTTTGGTCCCTTTTTCTTCTTGATTACCCGTCTAGTTGTTTTG
Plecotus auritus genome assembly, chromosome: 3.
OY734024.1:172703970-172703989
AACACAGACAAGAGGCCCCGAATCAGACAG172703970AAAGGGACCAAAGGAGGAGATAATCAGACCCTGCTCCCCAGTCTCTGCTT
Sequence 3924 from patent US 8692064.
HJ927779.1:58-77
ATAGAAGAAACATGTAGTGCTCCAAAACCA58AAAGGGACCAAAGGAGGAGAAACTTCAGGTAGTTGGAATAATAATGAGAG
Sequence 93505 from patent US 9029636.
HL002569.1:118-137
ATAGAAGAAACATGTAGTGCTCCAAAACCA118AAAGGGACCAAAGGAGGAGAAACTTCAGGTAGTTGGAATAATAATGAGAG
sa53f03.y1 Gm-c1004 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1004-3030 5' similar to WP:F19B6.4 CE05669 WHITE PROTEIN LIKE, mRNA sequence.
AI440750.1:137-156
ATAGAAGAAACATGTAGTGCTCAAAAACCA137AAAGGGACCAAAGGAGGAGAAACTTCAGGTTGGAATAATAATGAGAGAGA
sak48e09.y1 Gm-c1036 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1036-6354 5' similar to TR:Q9SZR9 Q9SZR9 PUTATIVE PROTEI, mRNA sequence.
BM308628.1:127-146
ATAGAAGAAACATGTAGTGCTCAAAAACCA127AAAGGGACCAAAGGAGGAGAAACTTCAGGTTGGAATAATAATGAGAGAGA
GLND046TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
FK018530.1:393-412
GTAGAAGAAACATGTAGTGCTCCAAAACCA393AAAGGGACCAAAGGAGGAGAAACTTCAGGTAGTTGGAATAATAATGAGAG
CCCC14185.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC14185 5', mRNA sequence.
GR845082.1:139-158
ATAGAAGAAACATGTAGTGCTCAAAAACCA139AAAGGGACCAAAGGAGGAGAAACTTCAGGTTGGAATAATAATGAGAGAGA
CCCC16662.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC16662 5', mRNA sequence.
GR849029.1:92-111
ATAGAAGAAACATGTAGTGCTCAAAAACCA92AAAGGGACCAAAGGAGGAGAAACTTCAGGTTGGAATAATAATGAGAGAGA
CCCC21075.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC21075 5', mRNA sequence.
GR856727.1:58-77
ATAGAAGAAACATGTAGTGCTCAAAAACCA58AAAGGGACCAAAGGAGGAGAAACTTCAGGTTGGAATAATAATGAGAGAGA
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3932211-3932230
CAAAACAACTAGACGGGTAATCAAGAAGAG3932211AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTACAAAAGGATG
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3933150-3933169
CAAAACAACTAGACGGGTAATCAAGAAGAG3933150AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTACAAAAGGATG
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3934089-3934108
CAAAACAACTAGACGGGTAATCAAGAAGAG3934089AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTACAAAAGGATG
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3935028-3935047
CAAAACAACTAGACGGGTAATCAAGAAGAG3935028AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTACAAAAGGATG
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3936906-3936925
CAAAACAACTAGACGGGTAATCAAGAAGAG3936906AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTACAAAAGGATG
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3941610-3941629
CAAAACAACAAAACGTGTAATCAAGAAGAA3941610AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTGCAAAAGGATG
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3943020-3943039
CAAAACAACAAAACGTGTAATCAAGAAGAA3943020AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTGCAAAAGGATG
Notodonta ziczac genome assembly, chromosome: Z.
OU974038.1:3943962-3943981
CAAAACAACAAAACGTGTAATCAAGAAAAA3943962AAAGGGACCAAAGGAGGAGATAACAGAAATAACCACCGTGCAAAAGGATG
Lathronympha strigana genome assembly, chromosome: 24.
OX421925.1:327516-327535
ATTCCGTCAATCGACCTGTGTAATCGACGA327516AAAGGGACCAAAGGAGGAGAGGCGTAGGGTATCCCCGATTATCGGCCTTG
Microchrysa polita genome assembly, chromosome: 5.
OX454419.1:1520715-1520734
ACGTCAGAATACATGTAAGGCTTCATTTTT1520715AAAGGGACCAAAGGAGGAGAAGAAGATTGGGTGATGCAGAAATCCTCCTG
Marseillevirus sp. strain f, complete genome.
OR343188.1:176878-176897
GAAGGTTGCGTTGTCAAGCTCCGCGTCGCT176878AAAGGGACCAAAGGAGGAGAAAATTGGTCGGGATGTAAGGAGTGTGCGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCCTCCTTTGGTCCCTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCCTCCTTTGGTCCCTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.340 | 1.331 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCCTCCTTTGGTCCCTTT&k=0&no_gap=0&offset=0&limit=50
2.640 | 1.301 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGGGACCAAAGGAGGAGA&k=0&no_gap=0&offset=0&limit=36
2.654 | 0.013 | cgi_end;

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