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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 21:01:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 7313 from patent US 8030546.
GY459538.1:436-458
GGGTCTTCTTTCCGGCGATACCACCAACGC436TCTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAGCGAG
Sequence 7313 from patent US 10597667.
MO970691.1:436-458
GGGTCTTCTTTCCGGCGATACCACCAACGC436TCTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAGCGAG
Vicia faba mRNA, clone: VfPES03D06, unspecified EST.
HX908270.1:443-465
CGGTCTTCTCTCAGGCGATACCACAAACGC443TCTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCAGTGGTGCAACGTG
Pisum sativum UNIFOLIATA protein (uni) mRNA, uni-JI813 allele, complete cds.
AF010190.2:691-713
CGGTCTTCTCTCCGGCGATACCACCAACGC691TCTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAACGTG
Pisum sativum UNIFOLIATA (UNI) gene, complete cds.
AF035163.1:567-589
CGGTCTTCTCTCCGGAGATACCACCAACGC567TCTCGATGCTCTCTCTCAAGAAGGTGCATACCATTATTTATATAAATTGACTA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:78998578-78998600
CCTCCTCTCCACCGACACCACAACCAACGC78998578TCTCGATGCTCTCTCTCAAGAAGGTGCGCACAACACAATAGACACAAGTTTGA
Lotus corniculatus var. japonicus transcription factor LFY gene, complete cds.
AY770393.1:435-457
CCTCCTCTCCACCGACACCACAACCAACGC435TCTCGATGCTCTCTCTCAAGAAGGTGCGCACAACACAATAGACACAAGTTTGA
Medicago truncatula Unifoliata protein (Uni) mRNA, complete cds.
AY928184.1:436-458
GGGTCTTCTTTCCGGCGATACCACCAACGC436TCTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAGCGAG
Medicago truncatula UNIFOLIATA protein (Uni) gene, complete cds.
DQ672589.1:433-455
GGGTCTTCTTTCCGGCGATACCACCAACGC433TCTCGATGCTCTCTCTCAAGAAGGTGCACAGTCATTTATAATAATTGACTCAA
Lathyrus aphaca genome assembly, chromosome: 6.
OZ014524.1:92355282-92355304
CGATCTTCTCTCTGGCGATACCACCAACGC92355282TCTCGATGCTCTCTCTCAAGAAGGTACGTACATAAAGTTATACATAAAAATTG
KR 1020120052533-A/4: METHOD FOR DEVELOPING GENE SPECIFIC MOLECULAR MARKERS USING PROMOTER REGION SEQUENCE POLYMORPHISM IDENTIFIED AMONG FLOWERING TIME RELATED GENES.
DI206223.1:1780-1802
TTGAGTCAATTATTATAAATGACTGTGCAC1780CTTCTTGAGAGAGAGCATCGAGAGCGTTGGTGGTATCGCCGGAAAGAAGACCC
Lotus japonicus genomic DNA, chromosome 1, clone: LjT41G02, TM1306.
AP007977.2:101075-101097
TCAAACTTGTGTCTATTGTGTTGTGCGCAC101075CTTCTTGAGAGAGAGCATCGAGAGCGTTGGTTGTGGTGTCGGTGGAGAGGAGG
Medicago truncatula clone mth2-9f16, complete sequence.
AC139708.15:36005-36027
TTGAGTCAATTATTATAAATGACTGTGCAC36005CTTCTTGAGAGAGAGCATCGAGAGCGTTGGTGGTATCGCCGGAAAGAAGACCC
Vicia faba genome assembly, chromosome: 3.
OX451738.1:1010883656-1010883678
CACGTTGCACCACTGGCTCCTCCGAAAAAC1010883656CTTCTTGAGAGAGAGCATCGAGAGCGTTTGTGGTATTGCCTGAGAGAAGACTG
Vicia faba genome assembly, chromosome: 3.
OX451738.1:1431899003-1431899025
CACGTTGCACCACTAGCTCCTCCGGCAAAC1431899003CTTCTTGAGAGAGAGCATCGAGAGCGTTTGTGGTATCACCTGAGAGAAGACTG
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:567325998-567326020
ATAAATTTTAATATATAACTATGTATGTAC567325998CTTCTTGAGAGAGAGCATCGAGAGCGTTGGTGGTGTCGCCGGAGAGAAGACCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCGATGCTCTCTCTCAAGAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCGATGCTCTCTCTCAAGAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.334 | 0.325 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCGATGCTCTCTCTCAAGAAG&k=0&no_gap=0&offset=0&limit=50
0.451 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCTTGAGAGAGAGCATCGAGA&k=0&no_gap=0&offset=0&limit=40
0.455 | 0.004 | cgi_end;

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