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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:59:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

UFL_190_79 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES811285.1:40-59
CAGTGTCTCTAACAGATCCATTCTCATCTC40TCTCGCTCTGAAAACCCGTACGGATTCTCAAATTGCCAACAATCAGGAAA
UFL_349_64 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES820668.1:2-21
C2TCTCGCTCTGAAAACCCGTACGGATTCTCAAATTGCCAACAATCAGGAAA
B05-077B08 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK799002.1:56-75
CAGTGTCTCTAACAGATCCATTCTCATCTC56TCTCGCTCTGAAAACCCGTACGGATTCTCAAATTGCCAACAAATCTGCTT
B08-77B08 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK799326.1:65-84
CAGTGTCTCTAACAGATCCATTCTCATCTC65TCTCGCTCTGAAAACCCGTACGGATTCTCAAATTGCCAACAAATCTGCTT
Gossypioides kirkii chromosome KI_05.
CP032247.1:8359787-8359806
CAGTGTCTCTAACAGATCCATTCTCATCTC8359787TCTCGCTCTGAAAACCCGTAAGGGCTCTCTAATATCCAACAAGTGAGTTT
Gossypium herbaceum isolate GPA1alz chromosome 5.
CP106702.1:11678707-11678726
CAGTGTCTCTAACAGATCCATTCTCATCTC11678707TCTCGCTCTGAAAACCCGTACGGATTCTCAAATTGCCAACAAGTGAGTTT
Gossypium herbaceum isolate Zhongcao1 chromosome 5.
CP106692.1:84820295-84820314
AAACTCACTTGTTGGCAATTTGAGAATCCG84820295TACGGGTTTTCAGAGCGAGAGAGATGAGAATGGATCTGTTAGAGACACTG
Gossypium bickii isolate GPG1lz chromosome 13.
CP106709.1:138321648-138321667
AAACTCACTTGTTGGCTATTAGAGAATCCG138321648TACGGGTTTTCAGAGCGAGAGAGATGAGAATGGATCTGTTAGAAACACTG
Gossypium rotundifolium isolate GPK201 chromosome 13.
CP106734.1:186619436-186619455
AAACTCACTTGTTGGCTATTAGAGAATCCG186619436TACGGGTTTTCAGAGCGAGAGAGATGAGAATGGATCTGTTAGAAACACTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCGCTCTGAAAACCCGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCGCTCTGAAAACCCGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.491 | 0.482 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCGCTCTGAAAACCCGTA&k=0&no_gap=0&offset=0&limit=50
0.566 | 0.075 | search_minus_done; http://172.18.8.135:50400/match?q=TACGGGTTTTCAGAGCGAGA&k=0&no_gap=0&offset=0&limit=44
0.568 | 0.002 | cgi_end;

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