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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:58:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Syngnathus acus genome assembly, chromosome: 2.
OX411222.1:14556801-14556820
CCAGCAGCGCCTTGTTCTGCCTCAGACCGA14556801TCTCGTCTTCCTCTTCTCCGACAAAAAGCAGAAGAAGAGCTTTTCCCAAG
Setaria viridis cultivar ME034v chromosome 1.
CP050795.1:40512695-40512714
AGCGTCCGCTCCTCTGAAGTCGTCGCCTCT40512695TCTCGTCTTCCTCTTCTCCGGTTGTTCCCGACCTACGGGATGGATGGATC
Neofusicoccum parvum strain DUCC19944 chromosome 4.
CP087209.1:1855642-1855661
ACGTGGGATTCCGCCTGTGATTGCGCAGAT1855642TCTCGTCTTCCTCTTCTCCGGCGCGCTACACGAACTCGCTGTGGGCGTGC
Euphorbia lathyris genome assembly, chromosome: 10.
OY755229.1:49854267-49854286
ATTTTCTCCCCAACCTCTATTGCATTTTGC49854267TCTCGTCTTCCTCTTCTCCGACAATTTTTATCCTCTTTTGACCAAGTAAG
Ectemnius continuus genome assembly, chromosome: 9.
OU342864.1:295632-295651
TTACCCAGTTGTGCCGCCACTGCTGGAACC295632TCTCGTCTTCCTCTTCTCCGACAGGCCAGCCAAGAATTGTCTCTCGAGCC
Haliclystus octoradiatus genome assembly, chromosome: 2.
OU744447.1:18239193-18239212
TGTCGAGTAATTCTTTGATGACAGCAACAG18239193TCTCGTCTTCCTCTTCTCCGTCATCGAAATCAACTAAGAAACAAAAACAA
Megachile ligniseca genome assembly, chromosome: 8.
OX243784.1:13999510-13999529
CGGTGAAAGGATTGCGTAAGCTTATCCCTC13999510TCTCGTCTTCCTCTTCTCCGTAGCGTATATTAAATGCACGCAGAAGAAGG
Bimastos eiseni genome assembly, chromosome: 8.
OY365813.1:22729468-22729487
CTCTTCACGTAATTCTCGTCTTACTCGCAT22729468TCTCGTCTTCCTCTTCTCCGTGTCGTTGTTGATTTCGCTGGCCGTAGTTG
Syngnathus acus genome assembly, chromosome: 2.
LR594588.1:15211468-15211487
CTTGGGAAAAGCTCTTCTTCTGCTTTTTGT15211468CGGAGAAGAGGAAGACGAGATCGGTCTGAGGCAGAACAAGGCGCTGCTGG
Solea senegalensis genome assembly, chromosome: H.
OW185639.1:1102198-1102217
CGGGGGTCATTAACGATGAGGAAGAGAAGA1102198CGGAGAAGAGGAAGACGAGAGTACATAAGAGAACAATGGAAAGCCCTGAA
5Z6III_JF_D10 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence.
EB656814.1:574-593
CTAACATCCATCCCGTCGGTCGGGAACCAC574CGGAGAAGAGGAAGACGAGAAGAGGCGAAGCAAAAAGGCGACGACTTCAG
26X_JF_F06 pAPO Cenchrus ciliaris cDNA 3', mRNA sequence.
EB659083.1:573-592
CTAACATCCATCCCGTCGGTCGGGAACCAC573CGGAGAAGAGGAAGACGAGAAGAGGCGAAGCAGAAAGGCGACGACTTCAG
TSA: Agrostis stolonifera AST_9238 mRNA sequence.
JU119443.1:57-76
GTGGTCTGAAGAGGAAGCGGAGGAGATCGC57CGGAGAAGAGGAAGACGAGAAGGAGCGAAGATGTTTCTTGTGGATTGGTT
Pan troglodytes DNA, clone: PTB-119D10.F.
AG112779.1:648-667
GACAGCGGAGGANGCACGGCGGCAGAGGGG648CGGAGAAGAGGAAGACGAGAAAAAGCAGAGAAGAGCGGAGCTAAGAGAGA
Cryptococcus neoformans var. grubii strain 125.91 mating type a locus, complete sequence.
AF542528.2:109133-109152
GGCGAATTTGATTCGGTCGAAAGAGAGATG109133CGGAGAAGAGGAAGACGAGAACGAAGAATGACGGGCACATTTAGCATATT
Cryptococcus neoformans isolate Bt63.
CP122412.1:176663-176682
GGCGAATTTGATTCGGTCGAAAGAGAGATG176663CGGAGAAGAGGAAGACGAGAACGAAGAATGACGGGCACATTTAGCATATT
Cryptococcus neoformans isolate IUM96-2828.
CP122427.1:254806-254825
GGCGAATTTGATTCGATCGAAAGAGAGATG254806CGGAGAAGAGGAAGACGAGAACGAAGAATGACGGGCACATTTAGCATATT
Cryptococcus neoformans strain transgenic JF289 chromosome 5.
CP142508.1:285639-285658
GGCGAATTTGATTCGGTCGAAAGAGAGATG285639CGGAGAAGAGGAAGACGAGAACGAAGAATGACGGGCACATTTAGCATATT
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 3B.
OX082599.1:376872888-376872907
ATGGCATGGGGACGGCAAGGAAGAGCTCGC376872888CGGAGAAGAGGAAGACGAGAGCGATGCGGCAACGGAGCGAAGCATCAAGT
Cenchrus americanus genome assembly, chromosome: PMC23DB3.
OX387241.1:2795246-2795265
CCTCGGATCCAACGCCCGTCAGGCGCTAAC2795246CGGAGAAGAGGAAGACGAGAGGAGGCCAGGCAGAAAGGCGACGACTTCGA
Cenchrus americanus genome assembly, chromosome: Pg3.
OZ001399.1:4543826-4543845
CCTCGGATCCAACGCCCGTCAGGCGCTAAC4543826CGGAGAAGAGGAAGACGAGAGGAGGCCAGGCAGAAAGGCGACGACTTCGA
Ceriagrion tenellum genome assembly, chromosome: 6.
OY720637.1:98046678-98046697
GGAGGTAGCTCAGATGTAGGCTCAAGTTGA98046678CGGAGAAGAGGAAGACGAGATGCCTCAGCTGGGCAAAATATTCGGCCAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCGTCTTCCTCTTCTCCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCGTCTTCCTCTTCTCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.200 | 0.191 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCGTCTTCCTCTTCTCCG&k=0&no_gap=0&offset=0&limit=50
0.471 | 0.272 | search_minus_done; http://172.18.8.135:50400/match?q=CGGAGAAGAGGAAGACGAGA&k=0&no_gap=0&offset=0&limit=42
0.481 | 0.009 | cgi_end;

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