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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:22:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Myotis daubentonii genome assembly, chromosome: 3.
OY725361.1:119750150-119750169
GTCATTGTAAAGACAAGTTTAAGGTCTGCC119750150TCTCTCTTTCTTCTCCATGCCCCACACTACCCCTAACCATCCCTGTTCCT
Geotrypetes seraphini genome assembly, chromosome: 3.
LR699148.1:197730295-197730314
CCCTGCCCTTCACCCTATGTCCAACATTTC197730295TCTCTCTTTCTTCTCCATGCATGTCTCCCTCCCCTCCACCATATGCAAGA
Geotrypetes seraphini genome assembly, chromosome: 5.
LR699150.1:215864562-215864581
CCCTACCCTCCACTCTATGGCCAACATTTC215864562TCTCTCTTTCTTCTCCATGCATGTCTCTCCCCTCCACCATATGCAGAATT
Geotrypetes seraphini genome assembly, chromosome: 6.
LR699151.1:46496150-46496169
GTAGAATAAGAAATGAAGGAACAACATTTT46496150TCTCTCTTTCTTCTCCATGCATGTCTCTCTCCTCCACCAGATGCAAGATT
Geotrypetes seraphini genome assembly, chromosome: 7.
LR699152.1:179004059-179004078
TACCCTCCACCCTATGTCCAACATTACTCT179004059TCTCTCTTTCTTCTCCATGCATGCCTCCCTCCCCTCCACCATATGCAGGA
Geotrypetes seraphini genome assembly, chromosome: 13.
LR699158.1:77020852-77020871
TCCTACTCTTCACTCTATATCCAACATTTC77020852TCTCTCTTTCTTCTCCATGCATGTCTCCCTCCCCTCCACCATATGCAGGA
Geotrypetes seraphini genome assembly, chromosome: 13.
LR699158.1:79914601-79914620
TCTCCCTGCTCTCCACCCTATGTCCATTTC79914601TCTCTCTTTCTTCTCCATGCATGTCTCCCTCCCCTCCACGATATGCAGGA
Psittacula echo genome assembly, chromosome: 4.
OY725423.1:19978153-19978172
GTGCTAGGAAGGGGGGGATCTTGTACATTT19978153TCTCTCTTTCTTCTCCATGCGAAATCACTGGTGATGTTGGACACAAACAG
Osmerus eperlanus genome assembly, chromosome: 17.
OY830030.1:1672791-1672810
TTCAACTCCTCTCTCCCTGTTTTCTCTCTC1672791TCTCTCTTTCTTCTCCATGCTTCTATTCTCCATCTTCATGTGGTTGATTT
Glycyrrhiza uralensis mRNA, clone: EPP006KIAA21S004379, 5'-end sequence.
FS992343.1:338-357
CCCCTCTTTCAAGTACCCGACGATCTCGCC338TCTCTCTTTCTTCTCCATGCCAAACCCAAACAACCTTCCAGTACCCTTCC
Gossypioides kirkii chromosome KI_07.
CP032249.1:33442299-33442318
TAGTTTTATATTTCTCAGTTTTTATTTTCT33442299TCTCTCTTTCTTCTCCATGCCTTGGGTTCTTTCTTTTTTCCGTTACCTCT
Gossypium rotundifolium isolate GPK201 chromosome 10.
CP106731.1:161512190-161512209
CCATATCCTCTCCTTCTTTTCCTTTCCTCT161512190TCTCTCTTTCTTCTCCATGCGCACTAGCCCCCGCAGTCCACGCTCGTACA
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:31407055-31407074
GCTCTCTCTCTCATTCTTCTCCATGCTCTC31407055TCTCTCTTTCTTCTCCATGCTCGCTCTCCCATTTTTCTCCATGCTCTCTC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:27842100-27842119
GCTCTCTCTCTCATTCTTCTCCACGCTTTC27842100TCTCTCTTTCTTCTCCATGCTCTCGCTCTCTTTCTTCTCCATGATTGCTT
XXX.
LR721778.1:11898000-11898019
TCAAGTATTTTGGCAATGTGGTGCAGATTC11898000TCTCTCTTTCTTCTCCATGCAAGCGGTTCTATTTCGATTCCCGTGGGAAG
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:30962062-30962081
GCTCTCTCTCTCATTGTTCTCCATGCTCTC30962062TCTCTCTTTCTTCTCCATGCTCGCTCTCCCATTTTTCTCCATGCTCTCTT
Malus domestica genome assembly, chromosome: 6.
OU696682.1:31572963-31572982
GCTCTCTCTCTCATTCTTCTCCATGCTCTC31572963TCTCTCTTTCTTCTCCATGCTCGCTCTCCCATTTTTCTCCATGCTCTCTC
Malus domestica genome assembly, chromosome: 6.
OU744547.1:31342600-31342619
GCTCTCTCTCTCATTCTTCTCCATGCTCTC31342600TCTCTCTTTCTTCTCCATGCTCGCTCTCCCATTTTTCTCCATGCTCTCTC
Malus domestica genome assembly, chromosome: 6.
OU744958.1:31359900-31359919
GCTCTCTCTCTCATTCTTCTCCATGCTCTC31359900TCTCTCTTTCTTCTCCATGCTCGCTCTCCCATTTTTCTCCATGCTCTCTC
Malus domestica genome assembly, chromosome: 6.
OU744996.1:27595901-27595920
GCTCTCTCTCTCATTCTTCTCCATGCTCTC27595901TCTCTCTTTCTTCTCCATGCTCGCTCTCCCATTTTTCTCCATGCTCTCTC
Parietaria judaica genome assembly, chromosome: 6.
OX940865.1:843120-843139
CAAGTTCATAAGCTCAAGAAATTTGAGTTT843120TCTCTCTTTCTTCTCCATGCGATTTCGGTTTCATCAGAGCCCGGAGAAAT
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:27258172-27258191
GCTCTCTCTCTCATTCTTCTCCATGCTCTC27258172TCTCTCTTTCTTCTCCATGCTCGCTCTCCCATTTTTCTCCATGCTCTCTC
Sphenostylis stenocarpa genome assembly, chromosome: 3.
OY731400.1:96811449-96811468
CCCTTTACACATGTTGGTGCAGTTATAGAG96811449TCTCTCTTTCTTCTCCATGCTCAGTTAGGTCATTTAAGTCTTGCCAAGTT
Primula veris genome assembly, chromosome: 2.
OY821741.1:16209010-16209029
CTCAAATTTCAAGTTGACGGTGTGGAACTG16209010TCTCTCTTTCTTCTCCATGCTCCATTCAAACAAGTAGTAGTCTTGCTCGG
Campoletis raptor genome assembly, chromosome: 10.
OX403631.1:12092581-12092600
CAAAATTCTCGCCCCCTCTATATCCATCTT12092581TCTCTCTTTCTTCTCCATGCTCTGTGCTTTTCAACCCCTTGGAAGAAGCC
Limnephilus auricula genome assembly, chromosome: Z.
OX638391.1:27489049-27489068
ACCAGAGATTAAGTTTAGCATAAATAATTA27489049TCTCTCTTTCTTCTCCATGCTGTATGAATGCATCTGTGAATGCTTTCCCA
Sciurus carolinensis genome assembly, chromosome: 3.
LR738592.1:40868735-40868754
CCCCCTGGGGAAGAAGGAAGGTGAGGAGGA40868735GCATGGAGAAGAAAGAGAGAAAGGAATTCAAAATATTGGAAGGAGGAAAG
Sciurus vulgaris genome assembly, chromosome: 3.
LR738613.1:42688486-42688505
CCCCCTGAGGAAGAAGGAAGGTGAGGAGGA42688486GCATGGAGAAGAAAGAGAGAAAGGGATTCAAAATATTGGAAGGAGGAAAG
Micromys minutus genome assembly, chromosome: 32.
OZ004812.1:12472850-12472869
GTGCGTGCAAGGTCCTAGGTTTGATCCCTT12472850GCATGGAGAAGAAAGAGAGAGGAGGAAAGGAGGGGAGGGAGAAGAAAAGT
Geotrypetes seraphini genome assembly, chromosome: 1.
LR699146.1:487552909-487552928
TCCTGCATATGGTAGAGGGGAGGGAGACAT487552909GCATGGAGAAGAAAGAGAGAAAAATGTTGGACATAGGGTGGAGGACAGGG
Geotrypetes seraphini genome assembly, chromosome: 5.
LR699150.1:253098274-253098293
CTTGCATATGGTGGAGGGGGAGGGAAGCAT253098274GCATGGAGAAGAAAGAGAGAGAAATGTTGGACAATAGGGTGGAGGGCAGG
Geotrypetes seraphini genome assembly, chromosome: 7.
LR699152.1:190716678-190716697
TCTTGCATATGGAGGGGGGAAGGGAGACAT190716678GCATGGAGAAGAAAGAGAGAGAGAAATGTTGGTCATAGGGTGGAGGGCAG
Geotrypetes seraphini genome assembly, chromosome: 14.
LR699159.1:69671287-69671306
TCCTGCATATAATAGAGGGGAGGGAGATAT69671287GCATGGAGAAGAAAGAGAGAGAAATATTGAACATAGGGTGGAGGGCAGGG
Sprattus sprattus genome assembly, chromosome: 14.
OY735298.1:16873996-16874015
AAAGTTAATAGGAAGGGGTGAAATAGAAAG16873996GCATGGAGAAGAAAGAGAGAGAAAGGGAGGAAATTGGGGAGAAAGGGAGA
Eutrigla gurnardus genome assembly, chromosome: 10.
OY741273.1:9085871-9085890
ATACACTTATATTAGACCTTGGAGAGCAAA9085871GCATGGAGAAGAAAGAGAGAAAAAAGAGATGGAGGGAGAAAGTGGGCCAT
Mobula hypostoma genome assembly, chromosome: X2.
OY992617.1:35802510-35802529
GTGCATTAAGAATGAGTAGGGCCAGAAATA35802510GCATGGAGAAGAAAGAGAGAAGAATCTGAGGAAAGGGAAGGCAGAATGTG
000903AALA002802HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA002802, mRNA sequence.
CN862787.1:58-77
GAGAGAGCATGGAGAAAAATGGGAGAGCGA58GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
000930AALA007911HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA007911, mRNA sequence.
CN864682.1:89-108
GAGAGAGCATGGAGAAAAATGGGAGAGCGA89GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
010419AASA004551HT (AASA) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASA004551, mRNA sequence.
CN879728.1:48-67
GAAAGAGAGCTGGAGAAAAAGGGAGAGCGA48GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAACAATGAGAGAGAGAGC
010812AASB005398HT (AASB) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASB005398, mRNA sequence.
CN882734.1:49-68
AAAGAGAGCATGGAGAAAAAGGGAGAGCGA49GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAACAATGAGAGAGAGAGC
010813AASB003579HT (AASB) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASB003579, mRNA sequence.
CN883027.1:47-66
GAAAGAGAGCTGGAGAAAAAGGGAGAGCGA47GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAACAATGAGAGAGAGAGC
010813AASB005692HT (AASB) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASB005692, mRNA sequence.
CN883508.1:31-50
AAAGAGAGCATGGAGAAAAAGGGAGAGCGA31GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAACAATGAGAGAGAGAGC
010626AAYA005152HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus domestica cDNA clone AAYA005152, mRNA sequence.
CN895436.1:83-102
GAGAGAGCATGGAGAAAAATGGGAGAGCGA83GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
000202AVBB001512HT (AVBB) Royal Gala young shoot Malus domestica cDNA clone AVBB001512, mRNA sequence.
CN934005.1:52-71
AAGAGAGCATGGAGAAAAATGGGAGAGCGA52GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAACAATGAGAGAGAGAGC
010920AVBC053023PG (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC053023, mRNA sequence.
CN943086.1:42-61
AAGAGAGCATGGAGAAAAATGGGAGAGCGA42GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAACAATGAGAGAGAGAGC
020805AVBC013146HT (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC013146, mRNA sequence.
CN948386.1:89-108
GAGAGAGCATGGAGAAAAATGGGAGAGCGA89GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
Mddb5010b10.y1 Mddb Malus domestica cDNA clone Mddb5010b10 5' similar to TR:Q9SU59 Q9SU59 PUTATIVE PEPTIDE TRANSPORTER, mRNA sequence.
CO867641.1:89-108
GAGAGAGCATGGAGAAAAATGGGAGAGCGA89GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
010916ABEA001927HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA001927, mRNA sequence.
EB146898.1:90-109
AGAGAGAGCATGGAGAAAAAGGGAGAGCGA90GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
011022ABEA003915HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA003915, mRNA sequence.
EB148454.1:75-94
GAGAGAGCATGGAGAAAAATGGGAGAGCGA75GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
Setaria viridis cultivar ME034v chromosome 1.
CP050795.1:6143841-6143860
GCAGAGGGAGGGGAGAGAAGGACAAAGGAT6143841GCATGGAGAAGAAAGAGAGAGAGATTGACAAAGGGGTCCCACAGCCAAAA
Corylus americana cultivar Rush chromosome 1.
CP125814.1:16881384-16881403
GCATGTGTCGGATAACCAGTTAAAATTGTG16881384GCATGGAGAAGAAAGAGAGAATGAGTGAGTTGAGGGGACGAGTCATTGAT
Glycine max cultivar Williams 82 chromosome 14.
CP126439.1:17866174-17866193
AGACATTGAACAACTAGCTCCCTGTATCCT17866174GCATGGAGAAGAAAGAGAGACACTCAGCTAAACTAGGGATAAAGATTACA
Warburgia ugandensis isolate CL-2023a chromosome 3.
CP141128.1:34392526-34392545
TGTAAGGGTGGAGTATAAGAGTGGATGGAT34392526GCATGGAGAAGAAAGAGAGAGAAGGTGTAAGGGTGAGATGGTGAAGGAGG
Warburgia ugandensis isolate CL-2023a chromosome 12.
CP141137.1:12759488-12759507
TGGCTTGTACTTGAAACACAAAAGAGAATT12759488GCATGGAGAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:3968859-3968878
GAGAGAGCATGGAGAAAAATGAGAGAGAGA3968859GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:4133902-4133921
GAGAGAGCATGGAGAAAAATGGGAGAGCGA4133902GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:4106604-4106623
GAGAGAGCATGGAGAAAAATGAGAGAGAGA4106604GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:4182291-4182310
GAGAGAGCATGGAGAAAAATGAGAGAGAGA4182291GCATGGAGAAGAAAGAGAGAGAGAGCATGGAGAAGAATGAGAGAGAGAGC
Capsella bursa-pastoris isolate WGS_leaf chromosome 16.
CP144198.1:9815307-9815326
AAATATCCAAAAGGAAAATAGAAGACACAT9815307GCATGGAGAAGAAAGAGAGAAGAAAGAGAGAATAAAGAAGTGAGGTGACG
Corylus avellana genome assembly, chromosome: ca1.
LR899423.1:18876898-18876917
GCATGTGTCGGATAACCAGTTAAAATTGTG18876898GCATGGAGAAGAAAGAGAGAATGAGTGAGTTGAGGGGACGAGTCATTGAT
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:3672299-3672318
GAAGAAATGAAGAAGATAGGAACAAAGATA3672299GCATGGAGAAGAAAGAGAGAGAGATTTCAATGATTAATACTCAAGAATTT
Vespula vulgaris genome assembly, chromosome: 21.
FR997688.1:2775808-2775827
GTATCGTTACGGGTAGATGCTTTTACGCTG2775808GCATGGAGAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
Thymelicus lineola genome assembly, chromosome: 19.
OZ010699.1:6966972-6966991
TAGGATTGTTCCTACCTTTTTACGTAGCGT6966972GCATGGAGAAGAAAGAGAGAAATATCCGTATAGGGTGGCTTAGAATACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCTCTTTCTTCTCCATGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCTCTTTCTTCTCCATGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.389 | 0.380 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCTCTTTCTTCTCCATGC&k=0&no_gap=0&offset=0&limit=50
1.201 | 0.811 | search_minus_done; http://172.18.8.135:50400/match?q=GCATGGAGAAGAAAGAGAGA&k=0&no_gap=0&offset=0&limit=24
1.224 | 0.024 | cgi_end;

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