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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 05:01:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Seq_ct_323 MAMB Musa acuminata subsp. malaccensis genomic, genomic survey sequence.
HN238580.1:616-635
AGAGGGCCGAGGCGGCGATGTCGAGGTCGC616TCTGAAGTCGGAGTTTGCCTCCGGGGAGAGAAGGATCGAGGCAGCGATCC
Musa troglodytarum cultivar karat chromosome 3.
CP097505.1:635008-635027
AGAGGGCCGAGGCGGCGATGTCGAGGTCGC635008TCTGAAGTCGGAGTTTGCCTCCGGGGAGGGAAGGATCGAGGCAACGATCG
Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:844804-844823
GGATCGCTGCCTCGATCCTTCTCTCCCCGG844804AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT
Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:837642-837661
GGATCGCTGCCTCGATCCTTCTCTCCCCGG837642AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A03.
HG996468.1:836018-836037
GGATCGCTGCCTCGATCCTTCTCTCCCCGG836018AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT
Musa schizocarpa genome assembly, chromosome: S03.
LS990917.1:858086-858105
GAATCGCTGCCTCGATCCTTCTCTCCCCGG858086AGGCAAACTCCGACTTCAGAGCGACCTCGACATCGCCGCCTCGGCCCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTGAAGTCGGAGTTTGCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGAAGTCGGAGTTTGCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.132 | 0.123 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGAAGTCGGAGTTTGCCT&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=AGGCAAACTCCGACTTCAGA&k=0&no_gap=0&offset=0&limit=48
0.155 | 0.003 | cgi_end;

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