GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:39:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig17321, mRNA sequence.
JW067565.1:537-561
TACTTTTTACTTTTCCTTTTTTGACAGGGG537TGCAAGAAGTGAAGATAGAATCAGAAAAAGATTTG
TSA: Capsicum annuum MGMT_Contig38587 mRNA sequence.
JW088831.1:601-625
TAAAACGAGTTATTAAAAAGATTAAAGGGG601TGCAAGAAGTGAAGATAGAATCAGAAAAAGATTTGGTAATGGTAAAGGGGACGAT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:182107542-182107566
TACTGTTTACTTTTCCTTTTTTGACAGGGG182107542TGCAAGAAGTGAAGATAGAATCAGAAAAAGATTTGGTAATGGTAAAGGGGACGAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:188253294-188253318
TACTGTTTACTTTTCCTTTTTTGACAGGGG188253294TGCAAGAAGTGAAGATAGAATCAGAAAAAGATTTGGTAATGGTAAAGGGGACGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTGATTCTATCTTCACTTCTTGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGATTCTATCTTCACTTCTTGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.087 | 0.079 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGATTCTATCTTCACTTCTTGCA&k=0&no_gap=0&offset=0&limit=50
0.135 | 0.048 | search_minus_done; http://172.18.8.135:50400/match?q=TGCAAGAAGTGAAGATAGAATCAGA&k=0&no_gap=0&offset=0&limit=50
0.138 | 0.003 | cgi_end;

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