GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 18:52:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys russatus genome assembly, chromosome: 30.
LR877241.1:1418704-1418723
TGAGAGAAATAATTAACTCTTAAAGTCAAA1418704TGCATGAGAGCTGTTGCAGAAGCCAGTCCTGACTGAAACATGCATGACAC
020813KAUA999077HT (KAUA) Actinidia chinensis CK51-05 petal Actinidia chinensis cDNA clone KAUAA99907, mRNA sequence.
FG485185.1:182-201
TTCAAGGACGACGGCTATAACGTTGCAAAG182TGCATGAGAGCTGTTGCAGAGCCCTTGCTTGCTAGTCACTTCGGGGAGGC
021106KAUB001468HT (KAUB) Actinidia chinensis CK51-05 petal Actinidia chinensis cDNA clone KAUBB00146, mRNA sequence.
FG486474.1:138-157
TTCAAGGACGACGGCTATAACGTTGCAAAG138TGCATGAGAGCTGTTGCAGAGCCCTTGCTTGCTAGTCACTTCGGGGAGGC
Actinidia deliciosa salicylic acid methyltransferase mRNA, complete cds.
OL661269.1:940-959
TTCAAGGACGACGGCTATAATGTTGCAAAG940TGCATGAGAGCTGTTGCAGAGCCCTTGCTTGCTAGTCACTTCGGGGAGGC
Volucella zonaria genome assembly, chromosome: 5.
OZ014534.1:115204648-115204667
ACGAAAGGATGGAATTAATACTAAAGGCCC115204648TGCATGAGAGCTGTTGCAGACCAAACTCTGATAGAAAATTTTTCGAGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTGCAACAGCTCTCATGCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGCAACAGCTCTCATGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGCAACAGCTCTCATGCA&k=0&no_gap=0&offset=0&limit=50
0.393 | 0.224 | search_minus_done; http://172.18.8.135:50400/match?q=TGCATGAGAGCTGTTGCAGA&k=0&no_gap=0&offset=0&limit=50
0.396 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).