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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 02:03:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Felis catus Senzu DNA, chromosome: A2, American Shorthair breed.
AP023153.1:164649950-164649969
GAGCCCTGGTGAACCCCACTTCTCTCTCTC164649950TCTGCCCTTGTTGGATTTTCTCTCCCTCTGTCTTTCTCTCTGTTTCTCTC
Sus scrofa scrofa breed NS chromosome 15.
CP071566.1:90627040-90627059
GGGCTAAGAGTCTAGCCGTGGTTTAGATTT90627040TCTGCCCTTGTTGGATTTTCTGCCCTGTGTATTGCCAAACTGCTATCAAT
Sus scrofa genome assembly, chromosome: 15.
OY997222.1:103335086-103335105
GGGCTAAGAGTCTAGCCGTGGTTTAGATTT103335086TCTGCCCTTGTTGGATTTTCTGCCCTGTGTATTGCCAAACTGCTATCAAT
Erpetoichthys calabaricus genome assembly, chromosome: 7.
LR536438.2:100677828-100677847
GAATCTGTTATTAAAGAAATGCAAGTGTGC100677828TCTGCCCTTGTTGGATTTTCTCTGCTCTAACTCTTATTAGGGCAGACGTT
Pholis gunnellus genome assembly, chromosome: 23.
OU342826.1:4609750-4609769
ATGCAGGGAGATCCAGTGATACAGTGCAAG4609750TCTGCCCTTGTTGGATTTTCCCCTTAAATGGAGAAATGTGACCACACTGC
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-45I22.
FP016103.2:53944-53963
GGGCTAAGAGTCTAGCCGTGGTTTAGATTT53944TCTGCCCTTGTTGGATTTTCTGCCCTGTGTATTGCCAAACTGCTATCAAT
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:156213882-156213901
GCACATTTGAAAAGAAGAGCGCTAACAACT156213882TCTGCCCTTGTTGGATTTTCTACTCCTGATTCTACTGCCACCTTCAAACC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:157048486-157048505
GCACATTTGAAAAGAAGAGCGCTAACAACT157048486TCTGCCCTTGTTGGATTTTCTACTCCTGATTCTACTGCCACCTTCAAACC
Drosophila histrio genome assembly, chromosome: 2.
OY282581.2:31954655-31954674
CCTCCTCTCTATCCTCTATCTTCTTCTATC31954655TCTGCCCTTGTTGGATTTTCCGACAGCAGCGTCTTGAATTTATGCACTGA
KS12023D05 KS12 Capsicum annuum cDNA, mRNA sequence.
CA523502.1:107-126
CGAGCTAAGGTGGCAGTACAATCAGGAGTA107GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCTCTTCTTTTCAAATGTGC
TSA: Capsicum annuum MGMT_Contig7670, mRNA sequence.
JW057914.1:415-434
CGAGCTAAGGTGGCAGTAGAATCAGGAGTA415GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCTCTTCTTTTCAAATGTGC
Capsicum annuum catf2 gene for acyl-transferase, partial cds.
AB206920.1:1115-1134
GGTTTGAAGGTGGCAGTAGAATCAGGAGTA1115GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCTCTTCTTTTCAAATGTGC
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:156279818-156279837
GGATTGAAGGTGGCAGCAGAATCAGGAGTA156279818GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:157114489-157114508
GGATTGAAGGTGGCAGCAGAATCAGGAGTA157114489GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum annuum cultivar RNaky AT3-2 pseudogene, partial sequence.
FJ687524.1:1155-1174
GGATTGAAGGTGGCAGCAGAATCAGGAGTA1155GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Nicotiana benthamiana AT3-2 pseudogene, partial sequence.
FJ687525.1:1173-1192
GGATTGAAGGTGGCAGCAGAATCAGGAGTA1173GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum frutescens cultivar BG2814-6 AT3-2 pseudogene, partial sequence.
FJ687526.1:923-942
GGATTGAAGGTGGCAGCAGAATCAGGAGTA923GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum frutescens cultivar PI594141 AT3-2 pseudogene, partial sequence.
FJ687527.1:1144-1163
GGATTGAAGGTGGCAGCAGAATCAGGAGCA1144GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Lycianthes dejecta AT3-2 pseudogene, partial sequence.
FJ687528.1:1198-1217
GGMTTSAAGGTGGCAGCAGAATCAGGAGTA1198GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum rhomboideum AT3-2 pseudogene, partial sequence.
FJ687529.1:1174-1193
GGATTGAAGGTGGCAGCAGAATCAGGAGTA1174GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum annuum cultivar Thai Hot AT3-2 pseudogene, partial sequence.
FJ687530.1:1154-1173
GGATTGAAGGTGGCAGCAGAATCAGGAGTA1154GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Solanum pennellii AT3-2 pseudogene, partial sequence.
FJ687531.1:1173-1192
GGATTGAAGGTGGCAGCAGAATCAGGAGTA1173GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum frutescens cultivar Tabasco acyltransferase (AT3-2) pseudogene, partial sequence.
FJ755160.1:1168-1187
GGATTGAAGGTGGCAGCAGAATCAGGAGCA1168GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum annuum cultivar Maor acyltransferase (AT3-2) pseudogene, partial sequence.
FJ755161.1:1173-1192
GGATTGAAGGTGGCAGCAGAATCAGGAGTA1173GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum frutescens cultivar BG2814-6 acyltransferase (AT3-2) pseudogene, partial sequence.
FJ755162.1:1176-1195
GGATTGAAGGTGGCAGAAGAATCAGAAGTA1176GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum chinense cultivar habanero acyltransferase (AT3-2) pseudogene, partial sequence.
FJ755163.1:1198-1217
GGCTTCAAGGTGGCAGCAGAATCAGGAGTA1198GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum chacoense acyltransferase (AT3-2) pseudogene, partial sequence.
FJ755164.1:1173-1192
GGATTGAAGGTGGCAGCAGAATCAGGAGTA1173GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCCCTTCTTTTCAAATGTGC
Capsicum annuum acyl-transferase (catf2) gene, partial cds.
MK084914.1:406-425
GGTTTGAAGGTGGCAGTAGAATCAGGAGTA406GAAAATCCAACAAGGGCAGAA
Capsicum annuum cultivar 754 acyltransferase 3-like protein (AT3-D2) mRNA, complete cds.
MK138365.1:793-812
CGAGCTAAGGTGGCAGTAGAATCAGGAGTA793GAAAATCCAACAAGGGCAGAAGTTGTTAGCGCTCTTCTTTTCAAATGTGC
Aleiodes testaceus genome assembly, chromosome: 12.
OY751422.1:1545577-1545596
CCTAAATTAATTCTTATTTCCCACCCTTTC1545577GAAAATCCAACAAGGGCAGACACTACATCATGGCTGTTCTTTCTTAAATC

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