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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 18:18:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Epinephelus fuscoguttatus DNA, LG24, complete sequence.
AP022698.1:21707985-21708004
ACTTTGCGCAATCAGTCCTCTCTCTCTTTC21707985TCTGCCTGTTGCTCTTCAAAGCTTGTGAGCTGTAAAAGATATTGAATTGA
Anabas testudineus genome assembly, chromosome: 4.
LR132043.1:20184708-20184727
TCAACAATTTTCAAACGACGTGTTCTTGCA20184708TCTGCCTGTTGCTCTTCAAATATACACACGGCCTTTTGTGTGCAGTATTT
Marchantia polymorpha subsp. ruderalis Tak-1 DNA, chromosome: 2.
AP019867.1:8720842-8720861
TCGCTCTTACAAGTGATAAAACTAGAGGTT8720842TCTGCCTGTTGCTCTTCAAAGACTTGTTGAGTTGCAATAGGAAAAGAGAG
Cicer arietinum chromosome Ca4.
CP039334.1:8437296-8437315
ACCCTCAGCTATTTACACTGGTTTTCTTTT8437296TCTGCCTGTTGCTCTTCAAACCCCATTCTCTTTGAATTTTCAATTTTGTA
Cicer arietinum chromosome Ca4.
CP040769.1:8437296-8437315
ACCCTCAGCTATTTACACTGGTTTTCTTTT8437296TCTGCCTGTTGCTCTTCAAACCCCATTCTCTTTGAATTTTCAATTTTGTA
Asterias rubens genome assembly, chromosome: 11.
LR699102.1:14933882-14933901
AGGAGCAACAGGCAGGACGATTTGGGGCAG14933882TTTGAAGAGCAACAGGCAGAGCGGTTTTTGGCAGTTAGAGTAGCAACTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTGCCTGTTGCTCTTCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGCCTGTTGCTCTTCAAA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.165 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGCCTGTTGCTCTTCAAA&k=0&no_gap=0&offset=0&limit=50
0.272 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGAAGAGCAACAGGCAGA&k=0&no_gap=0&offset=0&limit=45
0.272 | 0.001 | cgi_end;

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