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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-04 05:49:16, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Raphanus sativus mRNA, clone: RSCL08F24, 5' end sequence.
FY435646.1:137-156
AGCTCCTCTTCTTCTTCTTCTTCTATCAGA137TCTGGTGCCACTGTCTATCGCAGGATTTACATTTACAAAGAGGAAGGAGG
Raphanus sativus mRNA, clone: RSCS16H19, 5' end sequence.
FY451606.1:175-194
AGCTCCTCTTCTTCTTCTTCTTCTATCAGA175TCTGGTGCCACTGTCTATCGCAGGATTTACATTTACAAAGAGGAAGGAGG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_1852.
FX791730.1:241-260
AGCTCCTCTTCTTCTTCTTCTTCTATCAGA241TCTGGTGCCACTGTCTATCGCAGGATTTACATTTACAAAGAGGAAGGAGG
Raphanus sativus genome assembly, chromosome: 5.
LR778314.1:14121621-14121640
TCCTCTTCTTCTTCTTCTTCTTCTATCAGA14121621TCTGGTGCCACTGTCTATCGCAGGTACGATTCCTCTTTGTTCACGATTCG
Lissotriton vulgaris genome assembly, chromosome: 4_1.
OZ183355.1:1124804006-1124804025
CTAGGGAAGCTTCTTTATATGGGGCAGAAC1124804006TCTGGTGCCACTGTCTATCGAATTTGCTATCCATGACAGAGAACCTATTT
TSA: Raphanus sativus RS20515 mRNA sequence.
JT805062.1:1617-1636
CCTCCTTCCTCTTTGTAAATGTAAATCCTG1617CGATAGACAGTGGCACCAGATCTGATAGAAGAAGAAGAAGAAGAGGAGCT
Raphanus sativus genome assembly, chromosome: 2.
OY743208.1:29496515-29496534
CGAATCGTGAACAAAGAGGAATCGTACCTG29496515CGATAGACAGTGGCACCAGATCTGATAGAAGAAGAAGAAGAAGAAGAGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTGGTGCCACTGTCTATCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGGTGCCACTGTCTATCG | format : html | download : | debug :

0.010 | 0.010 | search_start;
0.741 | 0.731 | search_plus_done; http://172.18.8.135:50900/match?q=TCTGGTGCCACTGTCTATCG&k=0&no_gap=0&offset=0&limit=50
1.074 | 0.333 | search_minus_done; http://172.18.8.135:50900/match?q=CGATAGACAGTGGCACCAGA&k=0&no_gap=0&offset=0&limit=45
1.076 | 0.002 | cgi_end;

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