GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 23:10:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:55572233-55572253
AAACCAATAATGGTATAAAAGATGGTGTAA55572233TCTGTGGTGATGAGGTGAGAAAGATCATAGCAGATTTGTTCATTGATAATG
Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:50444022-50444042
ATAAAACCAATGACATAAAAGATGGTGTAA50444022TCTGTGGTGATGAGGTGAGAAAGATCATAGCAGATTTGTTCATTGATAATG
Trifolium repens mRNA, clone: WCC05p17_080, unspecified EST.
FY456056.1:170-190
CATTATCAATGAACAAATCTGCTATGATCT170TTCTCACCTCATCACCACAGATTACACCATCTTTTATACCATTATTGGTTT
Trifolium dubium genome assembly, chromosome: 15.
OX638076.1:3269224-3269244
CATTATCGATGAACAAATCTGCTATGATCT3269224TTCTCACCTCATCACCACAGATTACACCATCTTTTATGCCATTGGTTTTAT
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:43046416-43046436
CATTATCAATGAACAAATCTGTTATGATCT43046416TTCTCACCTCATCACCACAGATTACACCATCTTTTATGTCATTATTGGTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTGTGGTGATGAGGTGAGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTGTGGTGATGAGGTGAGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=TCTGTGGTGATGAGGTGAGAA&k=0&no_gap=0&offset=0&limit=50
0.193 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=TTCTCACCTCATCACCACAGA&k=0&no_gap=0&offset=0&limit=48
0.195 | 0.002 | cgi_end;

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