GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-02-07 12:53:01, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Cannabis sativa cultivar ERBxHO40_23 chromosome 5.
CP158644.1:21027753-21027772
GCCTTTTCGCATGAAGCTTTTTCACACGTT21027753TCTTCTTACGCTCCAACACATGAGTCAACTCCTCCATTTCTCTGACTACT
Cannabis sativa cultivar ERBxHO40_23 chromosome 7.
CP158648.1:7952258-7952277
GTCTTTTCGCAAGAAGCTTTCTCACCCGTT7952258TCTTCTTACGCTCCAACACATGTGTCAACTCTTCCATTTCTTTAACTACT
Cannabis sativa cultivar ERBxHO40_23 chromosome 7.
CP158658.1:8124129-8124148
GTCTTTTCGCAAGAAGCTTTCTCACCCGTT8124129TCTTCTTACGCTCCAACACATGTGTCAACTCTTCCATTTCTTTAACTACT
Triturus cristatus genome assembly, chromosome: 8.
OZ123749.1:563143423-563143442
TAGACTGCTGTGCAATGTTATTGTCCATGT563143423TCTTCTTACGCTCCAACACAGCCATGATCATGATGTTCTTAAGAGTACGG
TSA: Cannabis sativa PK21313.1_1.CasaPuKu mRNA sequence.
JP450090.1:1131-1150
AGTAGTTAAAGAAATGGAAGAGTTGACACA1131TGTGTTGGAGCGTAAGAAGAAACGGGTGAGAAAGCTTCTTGCGAAAAGAC
Cannabis sativa cultivar ERBxHO40_23 chromosome 5.
CP158654.1:56588369-56588388
AGTAGTCAGAGAAATGGAGGAGTTGACTCA56588369TGTGTTGGAGCGTAAGAAGAAACGTGTGAAAAAGCTTCATGCGAAAAGGC
Coremacera marginata genome assembly, chromosome: 4.
OU612046.1:165673263-165673282
ATTAAAACGAGTTGTTTTGTATCATGAGAG165673263TGTGTTGGAGCGTAAGAAGATGCTAGCAAAGAGCTGAGCATAGTTTTGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTCTTACGCTCCAACACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTCTTACGCTCCAACACA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.366 | 0.357 | search_plus_done; http://172.18.8.135:50800/match?q=TCTTCTTACGCTCCAACACA&k=0&no_gap=0&offset=0&limit=50
0.495 | 0.129 | search_minus_done; http://172.18.8.135:50800/match?q=TGTGTTGGAGCGTAAGAAGA&k=0&no_gap=0&offset=0&limit=46
0.497 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).