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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 15:20:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Globicephala melas genome assembly, chromosome: 3.
OY734041.1:163363143-163363162
CCCCCCGCCCCCCATCCTTCCCAGCTTGAC163363143TCTTCTTCATGGCATTTCCCACCACAGGCAAGTATGTGATTATTTCATCA
Cyprinus carpio genome assembly, scaffold: 000029039.
LN591248.1:38520-38539
ATTGACATGTCATTTTCAATCACATTCCCT38520TCTTCTTCATGGCATTTCCCCACTCTACCTTTCATACCATTCTGACATTG
Cyprinus carpio genome assembly, scaffold: 000029039.
LN591248.1:39140-39159
TAGTAAAGGTCATTTTCAATCACATTCCCT39140TCTTCTTCATGGCATTTCCCCACTCTACCTTTCATACCATTCTGACATTG
Trifolium repens mRNA, clone: WCC11j07_006, unspecified EST.
FY458021.1:252-271
TCTCTTCAACGATCTCAATCTAATCCTAAC252TCTTCTTCATGGCATTTCCCTTTTTCCTCTCTCTCTTCTTCCTCCAACAA
Trifolium repens isolate ACLI19 chromosome 05_0cc.
CP125844.1:19692680-19692699
TCTCTTCAACGATCTCAATCTAATCCTAAC19692680TCTTCTTCATGGCATTTCCCTTTTTCCTCTCTCTCTTCTTCCTCCAACAA
Trifolium fragiferum genome assembly, chromosome: 3.
OX940791.1:47463213-47463232
TCTCTTCAACGATCTCAATCCAATCTTAAC47463213TCTTCTTCATGGCATTTCCCTTTTTCCTCTCTATCTTCTTCCTCCAATAA
Plecotus auritus genome assembly, chromosome: 7.
OY734028.1:91091669-91091688
CAAAAGGACAAACATCCCAATAGAAAATTA91091669GGGAAATGCCATGAAGAAGACGCTCATGAAGAAAACATTGAGACAAACAA
XXX.
LR721783.1:17297128-17297147
AGGGTGCCAAAAGAGGCAGGACGTAGCTAA17297128GGGAAATGCCATGAAGAAGAGGCGCTAGAGAGAATTTAGCGAAAAGGAAA
Trout rhabdovirus 903/87 glycoprotein mRNA, complete cds.
AF320088.1:551-570
CTGACTTTGATTGACAACATATTTGAAGGA551GGGAAATGCCATGAAGAAGAATGTCCGTCTCTCCTTCACCAAGGTTTTTG
Trout rhabdovirus 903/87 nucleocapsid protein, phosphoprotein, matrix protein, and glycoprotein genes, complete cds; and polymerase protein gene, partial cds.
AF434991.1:4030-4049
CTGACTTTGATTGACAACATATTTGAAGGA4030GGGAAATGCCATGAAGAAGAATGTCCGTCTCTCCTTCACCAAGGTTTTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTCTTCATGGCATTTCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTCTTCATGGCATTTCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.387 | 0.378 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTCTTCATGGCATTTCCC&k=0&no_gap=0&offset=0&limit=50
0.499 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=GGGAAATGCCATGAAGAAGA&k=0&no_gap=0&offset=0&limit=44
0.502 | 0.003 | cgi_end;

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