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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 20:59:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Xyrichtys novacula genome assembly, chromosome: 16.
OY660879.1:12471992-12472011
ATCTCCTTCTATTTTAACTCACAAGTTTCC12471992TCTTCTTCCCTGACCACAGCTTTGTTTGTGACAACTGCCTCAAAAAAGCC
Raphanus sativus mRNA, clone: RSCS01O18, 5' end sequence.
FY446523.1:14-33
GGCTTTCTCTTAG14TCTTCTTCCCTGACCACAGCGACGTCTCTTCTTCTTCTTCTTCATCATCT
Raphanus sativus mRNA, clone: RSCS12O08, 5' end sequence.
FY450329.1:91-110
ATAGCGGAAGAGGAATGGGCTTTCTCTTAG91TCTTCTTCCCTGACCACAGCGACGTCTCTTCTTCTTCTTCTTCATCATCT
Raphanus sativus mRNA, clone: RSCS20E06, 5' end sequence.
FY452971.1:83-102
ATAGCGGAAGAGGAATGGGCTTTCTCTTAG83TCTTCTTCCCTGACCACAGCGACGTCTCTTCTTCTTCTTCTTCATCATCT
Raphanus sativus mRNA, clone: RSCS23E22, 5' end sequence.
FY454057.1:94-113
ATAGCGGAAGAGGAATGGGCTTTCTCTTAG94TCTTCTTCCCTGACCACAGCGACGTCTCTTCTTCTTCTTCTTCATCATCT
TSA: Raphanus sativus RS05293 mRNA sequence.
JT789840.1:253-272
ATAGCGGAAGAGGAATGGGCTTTCTCTTAG253TCTTCTTCCCTGACCACAGCGACGTCTCTCCTTCTTCTTCTTCTTCATCA
TSA: Raphanus sativus RS05294 mRNA sequence.
JT789841.1:113-132
ACCTTCTCATTGTTCTAATGATTGACTTAG113TCTTCTTCCCTGACCACAGCGACGTCTCTCCTTCTTCTTCTTCTTCATCA
Raphanus sativus genome assembly, chromosome: 5.
OY743211.1:30785601-30785620
ATAGCGGAAGAGGAATGGGCTTCCTCTTAG30785601TCTTCTTCCCTGACCACAGCGACGTATCTCCTTCTTCTTCTTCATCATCA
Limnephilus marmoratus genome assembly, chromosome: 6.
OU862911.1:20166634-20166653
AGTATCAAGTCGGAGACATTAAATGAAGTT20166634TCTTCTTCCCTGACCACAGCTTGGCTCATGCCTTCATGCATGGCCAGCCT
Limnephilus rhombicus genome assembly, chromosome: Z.
OV815276.1:19930049-19930068
AGTACCAAGTCGGAGACATTAAATGAAGTT19930049TCTTCTTCCCTGACCACAGCTTGGCTCATGCCTTCATGCATGGCCAGCCT
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:77000469-77000488
TCTAGAGAGATAACTAAAAAAAACTGGGGT77000469GCTGTGGTCAGGGAAGAAGACTTCATTACGGGTTTGGATGCAGCAATTTC
Pipistrellus pygmaeus genome assembly, chromosome: 3.
OX465304.1:79652564-79652583
TCTAGAGAGATAACTAAAAAAAACTGGGGT79652564GCTGTGGTCAGGGAAGAAGACTTCATTACGGGTTAGGATGCAGCAATTTC
TSA: Raphanus sativus var. sativus RNA, contig: WG3_637.
FX662295.1:1210-1229
TGATGAAGAAGAAGAAGAAGGAGAGACGTC1210GCTGTGGTCAGGGAAGAAGACTAAGAGAAAGCCCATTCCTCTTCCGCTAT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_10074.
FX792461.1:1371-1390
TGATGAAGAAGAAGAAGAAGGAGAGACGTC1371GCTGTGGTCAGGGAAGAAGACTAAGAGAAA
Raphanus sativus genome assembly, chromosome: 4.
LR778313.1:13247349-13247368
TGATGATGAAGAAGAAGAAGGAGATACGTC13247349GCTGTGGTCAGGGAAGAAGACTAAGAGGAAGCCCATTCCTCTTCCGCTAT
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:371934241-371934260
GGAAGTGAAAAGGTGACTTGTGGAGGGGTG371934241GCTGTGGTCAGGGAAGAAGAAGGGGAAGATTTTCCAGATCCTGATGTGGG
Limnephilus lunatus genome assembly, chromosome: 1.
OU830592.1:32144493-32144512
AGGCTGGCCATGCATGAAGGCATGAGCCAA32144493GCTGTGGTCAGGGAAGAAGAAACTTCATTTAATGTCTCCGACTTGTTACT
Limnephilus auricula genome assembly, chromosome: 5.
OX638393.1:25262192-25262211
AGGCTGGCCATGCATGAAGGCATGAGCCAG25262192GCTGTGGTCAGGGAAGAAGAAACTTCATTTAATGTCTCCGACTTGTGTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTCTTCCCTGACCACAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTCTTCCCTGACCACAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.633 | 0.624 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTCTTCCCTGACCACAGC&k=0&no_gap=0&offset=0&limit=50
0.778 | 0.145 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGTGGTCAGGGAAGAAGA&k=0&no_gap=0&offset=0&limit=40
0.783 | 0.005 | cgi_end;

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