GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:19:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Humulus lupulus genome assembly, chromosome: X.
OY720650.1:203156512-203156531
CTCATCATGCAACTTCAGTGCTTGGTTTCT203156512TCTTGGAAAAGATCCCTCCTATCAAAGGAATCAAAGGCTTCTTCTTCTTC
Athripsodes cinereus genome assembly, chromosome: 10.
OX388314.1:6513807-6513826
CTATATAAGATCAGTCATCTTGATCTGTTG6513807TCTTGGAAAAGATCCCTCCTGCGACGCTGATTTCACATCTCTTAGATGCT
TSA: Cannabis sativa PK04485.1_1.CasaPuKu mRNA sequence.
JP450128.1:797-816
GAAGAAGAAGAAGCCTTTGATTCCATTAAT797AGGAGGGATCTTTTCCAAGAAGAAACCAAGCACCGAAGTTGCATGAGACC
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295787_c0_seq2.
LA658960.1:1308-1327
GAAGAAGAAGAAGCCTTTGATTCCTTTGAT1308AGGAGGGATCTTTTCCAAGAAGAAACCAAGCACTGAAGTTGCATGATGAG
Corylus avellana genome assembly, chromosome: ca11.
LR899433.1:6810882-6810901
TTTTTTTTAATTGAATAAGAAAAGGGCTAC6810882AGGAGGGATCTTTTCCAAGAAATCCTGAAAACGAAAAAGGGGTGGACTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTTGGAAAAGATCCCTCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTGGAAAAGATCCCTCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.336 | 0.328 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTGGAAAAGATCCCTCCT&k=0&no_gap=0&offset=0&limit=50
0.470 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=AGGAGGGATCTTTTCCAAGA&k=0&no_gap=0&offset=0&limit=48
0.472 | 0.002 | cgi_end;

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