GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 09:35:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

NF023G05PL1F1037 Phosphate starved leaf Medicago truncatula cDNA clone NF023G05PL 5', mRNA sequence.
BE324936.1:141-162
CAGTAATGCATCTTTAAACTTACCGCAGAG141TCTTGTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGGCTTGCAG
EST432966 KV1 Medicago truncatula cDNA clone pKV1-17B8, mRNA sequence.
BF004468.1:211-232
CAGTAATGCATCTTTAAACTTACCGCAGAG211TCTTGTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGGCTTGCAG
EST647831 HOGA Medicago truncatula cDNA clone HOGA-33K14, mRNA sequence.
CB895039.1:371-392
CAGTAATGCATCTTTAAACTTACCGCAGAG371TCTTGTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGGCTTGCAG
s13dNF69D11MJ090_272184 Methyl Jasmonate-Elicited Root Cell Suspension Culture Medicago truncatula cDNA, mRNA sequence.
CX532952.1:173-194
CAGTAATGCATCTTTAAACTTACCGCAGAG173TCTTGTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGGCTTGCAG
Medicago truncatula chromosome 8 clone mth2-80a22, WORKING DRAFT SEQUENCE, 6 unordered pieces.
AC146708.20:98784-98805
CAGTAATGCATCTTTAAACTTACCGCAGAG98784TCTTGTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGGCTTGCAG
TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_6063 mRNA sequence.
JL887259.1:576-597
CTGCAAGCCCTGAGGGTTTCCAGGTGGCAA576CATCCTTGCATTTGCTACAAGACTCTGCGGTAAGTTTAAAGATGCATTACTG
MBEFR45TF mth2 Medicago truncatula genomic clone 46G18, genomic survey sequence.
CG919575.1:547-568
CTGCAAGCCCTGAGGGTTTCCAGGTGGCAA547CATCCTTGCATTTGCTACAAGACTCTGCGGTAAGTTTAAAGATGCATTACTG
mth2-166B16RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR492720.1:625-646
CTGCAAGCCCTGAGGGTTTCCAGGTGGCAA625CATCCTTGCATTTGCTACAAGACTCTGCGGTAAGTTTAAAGATGCATTACTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTTGTAGCAAATGCAAGGATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTGTAGCAAATGCAAGGATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.377 | 0.369 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTGTAGCAAATGCAAGGATG&k=0&no_gap=0&offset=0&limit=50
0.511 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=CATCCTTGCATTTGCTACAAGA&k=0&no_gap=0&offset=0&limit=45
0.513 | 0.002 | cgi_end;

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