GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-13 03:59:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Chilo suppressalis genome assembly, chromosome: 1.
OU963894.1:13361369-13361388
ACGTATTCCCGTAAAATCTTTTCTCTAGGA13361369TCTTTCCATTTACACCCCGTCCGAAAAGAAGTTTCATTGTTTATTCAGTT
Chilo suppressalis genome assembly, chromosome: 28.
OU963921.1:6479177-6479196
TGTGACACTCTTTTCATCTTTTCCATAGGA6479177TCTTTCCATTTACACCCCGTCCGAAGAGATTTCAATGTGTTTGTCTTTTG
ICPM1F11 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM1F11 5', genomic survey sequence.
FI131389.1:382-401
AAGGGCTTAGCTTCTTTTATAGTGTGTTTT382ACGGGGTGTAAATGGAAAGATTGGGAACTAAAAAAGAAAAAGAAACACGT
Chilo suppressalis genome assembly, chromosome: 2.
OU963895.1:2688876-2688895
GAAAGGACAATTTTTGTAACTTCTTTTCGG2688876ACGGGGTGTAAATGGAAAGAAATCTATGGAAACGATGGAACGGAAATGCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTTCCATTTACACCCCGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTTCCATTTACACCCCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.392 | 0.383 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTTCCATTTACACCCCGT&k=0&no_gap=0&offset=0&limit=50
0.535 | 0.142 | search_minus_done; http://172.18.8.135:50400/match?q=ACGGGGTGTAAATGGAAAGA&k=0&no_gap=0&offset=0&limit=48
0.536 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).