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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-24 15:26:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vigna angularis mRNA, clone: VES02L16.
HX943116.1:80-99
TTTGTTGGGTTGGTTTTTTGTTCTTGTTTC80TCTTTGGCGAGTTGATGATGATGACACGCGCCGTATTGTTGGACGCGCCG
Vigna angularis mRNA, clone: VES06P24.
HX944722.1:76-95
TTTGTTGGGTTGGTTTTTTGTTCTTGTTTC76TCTTTGGCGAGTTGATGATGATGACACGCGCCGTATTGTTGGACGCGCCG
Vigna angularis mRNA, clone: VES15O18.
HX948090.1:85-104
TTTGTTGGGTTGGTTTTTTGTTCTTGTTTC85TCTTTGGCGAGTTGATGATGATGACACGCGCCGTATTGTTGGACGCGCCG
Vigna angularis mRNA, clone: VES20A22.
HX949643.1:113-132
TTTGTTGGGTTGGTTTTTTGTTCTTGTTTC113TCTTTGGCGAGTTGATGATGATGACACGCGCCGTATTGTTGGACGCGCCG
Vigna angularis mRNA, clone: VES21D03.
HX950071.1:82-101
TTTGTTGGGTTGGTTTTTTGTTCTTGTTTC82TCTTTGGCGAGTTGATGATGATGACACGCGCCGTATTGTTGGACGCGCCG
BH_PBa034D24.F BH_PBa Boechera holboellii genomic 5', genomic survey sequence.
KS386151.1:617-636
CTTCTTGCTGCTAAACCAAGCAGATACTCC617TCTTTGGCGAGTTGATGATGTTGCTTGGCTTGAAAGAAACAACATGATCC
BS_LBa042K03.F BS_LBa Boechera stricta genomic 5', genomic survey sequence.
KS416730.1:249-268
CTTCTTGCTGCTAAACCAAGCAGATACATC249TCTTTGGCGAGTTGATGATGTTGCTTGGCTTGAAAGAAACAACATGATCC
Cenchrus purpureus cultivar elephant grass chromosome B7.
CP053467.1:84507024-84507043
ACATCACCCATAATTTGATCAATGGGGTCA84507024TCTTTGGCGAGTTGATGATGAACTCTTGGTTGATCAACCGGCACTTGAGT
Cenchrus americanus genome assembly, chromosome: PMC23DB3.
OX387241.1:220035591-220035610
ATGTCACCCATAATTTGGTCATTGGGGTGA220035591TCTTTGGCGAGTTGATGATGAATTCTTGGTTGATCAACCGGTTCTTGAGT
Cenchrus americanus genome assembly, chromosome: Pg3.
OZ001407.1:238710137-238710156
ATGTCACCCATAATTTGGTCATTGGGGTGA238710137TCTTTGGCGAGTTGATGATGAATTCTTGGTTGATCAACCGGTTCTTGAGT
Brachypalpus laphriformis genome assembly, chromosome: 4.
OX246756.1:83496765-83496784
TTCTTAGCTCCATCACTCCACCACCATGTT83496765TCTTTGGCGAGTTGATGATGGCCTTTTGAAGCTCCTAGCAGTGATTTGGC
Pyrausta purpuralis genome assembly, chromosome: 5.
OZ001646.1:745222-745241
TGTTCGTATTCAGCCATGAAGGCTTTGTAA745222TCTTTGGCGAGTTGATGATGACGTTCAAATTTCTTCTCTAAATTTCGAAA
Pyrausta purpuralis genome assembly, chromosome: 22.
OZ001664.1:12841800-12841819
TGTTCGTATTCAGCCATGAAGGCTTTGTAA12841800TCTTTGGCGAGTTGATGATGACGTTCAAATTTCTTCTCTAAATTTCGAAA
BH_PBa017N04.F BH_PBa Boechera holboellii genomic 5', genomic survey sequence.
KS410605.1:905-924
GGATCATGTTGTTTTCTTTCAAGCCAAGAA905CATCATCAACTCGCCAAAGAGGAGTATCTGCCTGGGTTAACCACCAAAAA
Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:38995444-38995463
CGGCGCGTCCAACAATACGGCGCGTGTCAT38995444CATCATCAACTCGCCAAAGAGAAACAAGAACAAAAAACCAACCCAACAAA
Arabidopsis arenosa genome assembly, chromosome: 1.
LR999451.1:12638413-12638432
GGATCTTATTGTTTCTTTGACATCAAGCAA12638413CATCATCAACTCGCCAAAGAGAATAGTATCTGCATGGTTAAGGAGCAAGA
Cenchrus americanus genome assembly, chromosome: PMC23DB2.
OX387240.1:237665695-237665714
ACTCAAGAACCAATTGATCAACCAAGAATT237665695CATCATCAACTCGCCAAAGATCACCCCATTGACCAAATCATGGGTGACAT
Cenchrus americanus genome assembly, chromosome: Pg2.
OZ001398.1:252824066-252824085
ACTCAAGAACCAATTGATCAACCAAGAATT252824066CATCATCAACTCGCCAAAGATCACCCCATTGACCAAATCATGGGTGACAT
Cenchrus americanus genome assembly, chromosome: Pg2.
OZ001406.1:257613184-257613203
ACTCAAGAACCAATTGATCAACCAAGAATT257613184CATCATCAACTCGCCAAAGATCACCCCATTGACCAAATCATGGGTGACAT
Brachypalpus laphriformis genome assembly, chromosome: 3.
OX246755.1:61549983-61550002
GCCAAATCACTGCTAGGAGCTTCAAAAGGC61549983CATCATCAACTCGCCAAAGAAACATGGTGGTGGAGTGATGAAGGTGATAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTTGGCGAGTTGATGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTTGGCGAGTTGATGATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.008 | 0.999 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTTGGCGAGTTGATGATG&k=0&no_gap=0&offset=0&limit=50
1.175 | 0.167 | search_minus_done; http://172.18.8.135:50400/match?q=CATCATCAACTCGCCAAAGA&k=0&no_gap=0&offset=0&limit=37
1.179 | 0.004 | cgi_end;

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