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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-07 10:56:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Acomys russatus genome assembly, chromosome: 24.
LR877235.1:32853085-32853104
CCTGTCCTTTCTCCTCTGTGTCTTGCTTGC32853085TCTTTGTCAGAGGGTGGACATGCAGCTGCACAGCTAAAGGTGGTTGCTAT
RFO2.001N05F000720 RFO2 Brassica napus cDNA clone RFO2001N05, mRNA sequence.
CD838071.1:176-195
GCCTCCAATGCTGCCCAATCCGCCAAGGAA176TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
RFO2.110L16F010522 RFO2 Brassica napus cDNA clone RFO2110L16, mRNA sequence.
CD838313.1:193-212
GCCTCCAATGCTGCCCAATCCGCCAAGGAA193TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
RFO2.112J22F010523 RFO2 Brassica napus cDNA clone RFO2112J22, mRNA sequence.
CD838805.1:174-193
ACCTCCAATGCTGCCCAATCCGCCAAGGAA174TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
RFO2.124P15F010620 RFO2 Brassica napus cDNA clone RFO2124P15, mRNA sequence.
CD841862.1:169-188
GCCTCCAATGCTGCCCAATCCGCCAAGGAA169TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
RFO2.127M05F010919 RFO2 Brassica napus cDNA clone RFO2127M05, mRNA sequence.
CD842488.1:179-198
ACCTCCAATGCTGCCCAATCCGCCAAGGAA179TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
RFO2.129E07F010921 RFO2 Brassica napus cDNA clone RFO2129E07, mRNA sequence.
CD842844.1:168-187
GCCTCCAATGCTGCCCAATCCGCCAAGGAA168TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
RFO2.130H12F011011 RFO2 Brassica napus cDNA clone RFO2130H12, mRNA sequence.
CD843094.1:173-192
GCCTCCAATGCTGCCCAATCCGCCAAGGAA173TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
RFO2.132M16F011016 RFO2 Brassica napus cDNA clone RFO2132M16, mRNA sequence.
CD843566.1:174-193
ACCTCCAATGCTGCCCAATCCGCCAAGGAA174TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
RFO2.134O10F011010 RFO2 Brassica napus cDNA clone RFO2134O10, mRNA sequence.
CD843978.1:177-196
ACCTCCAATGCTGCCCAATCCGCCAAGGAA177TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
RFO2.139C10F011221 RFO2 Brassica napus cDNA clone RFO2139C10, mRNA sequence.
CD844545.1:198-217
ACCTCCAATGCTGCCCAATCCGCCAAGGAA198TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
RFO2.141A05F011226 RFO2 Brassica napus cDNA clone RFO2141A05, mRNA sequence.
CD844951.1:198-217
ACCTCCAATGCTGCCCAATCCGCCAAGGAA198TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
RFO2.141K13F011226 RFO2 Brassica napus cDNA clone RFO2141K13, mRNA sequence.
CD845105.1:185-204
ACCTCCAATGCTGCCCAATCCGCCAAGGAA185TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
12JKBNM1_UP_001_E03_19NOV2003_023 12JKBNM1 Brassica napus cDNA 5', mRNA sequence.
CN727724.1:176-195
GCCTCCAATGCTGCCCAATCCGCCAAGGAA176TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
12JKBNM1_UP_003_C05_19NOV2003_043 12JKBNM1 Brassica napus cDNA 5', mRNA sequence.
CN727889.1:168-187
ACCTCCAATGCTGCCCAATCCGCCAAGGAA168TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
12JKBNM1_UP_003_D08_19NOV2003_058 12JKBNM1 Brassica napus cDNA 5', mRNA sequence.
CN727904.1:177-196
ACCTCCAATGCTGCCCAATCCGCCAAGGAA177TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
78-E022824-021-016-K19-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022K1916Q, mRNA sequence.
CX189236.1:152-171
ACCTCCAATGCTGCCCAATCCGCCAAGGAA152TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
65-E019365-021-009-B17-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022B179Q, mRNA sequence.
CX190468.1:121-140
GCCTCCAATGCTGCCCAATCCGCCAAGGAA121TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
49-E010651-021-004-A14-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022A144Q, mRNA sequence.
CX191812.1:165-184
ACCTCCAATGCTGCCCAATCCGCCAAGGAA165TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
22-E023031-021-019-K06-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022K0619Q, mRNA sequence.
CX194285.1:149-168
GCCTCCAATGCTGCCCAATCCGCCAAGGAA149TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
17-E011128-021-005-A06-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022A065Q, mRNA sequence.
CX194786.1:145-164
ACCTCCAATGCTGCCCAATCCGCCAAGGAA145TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
Brassica oleracea var. viridis mRNA, clone: KALE-023H10, 5' end sequence.
DK464518.1:177-196
ACCTCCAATGCTGCCCAATCCGCCAAGGAA177TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
Brassica oleracea var. viridis mRNA, clone: KALE-023H10, 3' end sequence.
DK524132.1:177-196
ACCTCCAATGCTGCCCAATCCGCCAAGGAA177TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
13JKBNM2_UP_025_A02_15DEC2003_016 13JKBNM2 Brassica napus cDNA 5', mRNA sequence.
ES265319.1:169-188
GCCTCCAATGCTGCCCAATCCGCCAAGGAA169TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
44JK5DM_UP_009_B10_26MAY2004_078 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES266088.1:168-187
GCCTCCAATGCTGCCCAATCCGCCAAGGAA168TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
69JKME5D_T3_001_E09_26MAR2005_071 69JKME5D Brassica napus cDNA 5', mRNA sequence.
ES266298.1:83-102
ACCTCCAATGCTGCCCAATCCGCCAAGGAA83TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
JKBNM3_T7_003_D06_23JAN2004_042 JKBNM3 Brassica napus cDNA 3', mRNA sequence.
ES270214.1:121-140
GCCTCCAATGCTGCCCAATCCGCCAAGGAA121TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
44JK5DM_UP_015_F12_02JUL2006_086 Brassica napus 44JK5DM Brassica napus cDNA 5', mRNA sequence.
ES983548.1:173-192
GCCTCCAATGCTGCCCAATCCGCCAAGGAA173TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
0141469 Brassica napus Early anther Brassica napus cDNA, mRNA sequence.
EV151547.1:178-197
ACCTCCAATGCTGCCCAATCCGCCAAGGAA178TCTTTGTCAGAGGGTGGACAGCAGCTGAGGCAGAAAGCACAGGGTGCCAC
BR051683 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-38H02 5', mRNA sequence.
EX067039.1:39-58
GCCTCCAATGCTGCCCAATCCGCCAAGGAA39TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
RR2CN20TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EX757339.1:176-195
GCCTCTAATGCTGCTCAATCTGCCAAGGAA176TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RR3BL58TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EX761893.1:171-190
GCCTCTAATGCTGCTCAATCTGCCAAGGAA171TCTTTGTCAGAGGGTGGACAGCAGTTGAAGCAGAAAGCACAGGGTGCGAC
RS2BV12TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EX895467.1:167-186
GCCTCTAATGCTGCTCAATCTGCCAAGGAA167TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RS2CO22TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EX896918.1:172-191
GCCTCTAATGCTGCTCAATCTGCCACGGAA172TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RR1D155TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EY896811.1:178-197
GCCTCTAATGCTGCTCAATCTGCCAAGGAA178TCTTTGTCAGAGGGTGGACAGCAGTTGAAGCAGAAAGCACAGGGTGCGAC
RR1DS64TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EY899227.1:169-188
GCCTCTAATGCTGCTCAATCTGCCAAGGAA169TCTTTGTCAGAGGGTGGACAGCAGTTGAAGCAGAAAGCACAGGGTGCGAC
RS1DB80TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EY930522.1:178-197
GCCTCTAATGCTGCTCAATCTGCCAAGGAG178TCTTTGTCAGAGGGTGGACAGCAGTTGAAGCAGAAAGCACAGGGTGCGAC
RS2E791TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY940533.1:172-191
GCCTCTAATGCTGCTCAATCTGCCAAGGAA172TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RS2EK57TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY941643.1:170-189
GCCTCTAATGCTGCTCAATCTGCCAAGGAA170TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RR2EG63TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD540060.1:178-197
GCCTCTAATGCTGCTCAATCTGCCAAGGAA178TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RR2FR21TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD543948.1:178-197
GCCTCTAATGCTGCTCAATCTGCCAAGGAA178TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RR4F148TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
FD557859.1:172-191
GCCTCTAATGCTGCTCAATCTGCCAAGGAA172TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RS2FS51TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD571601.1:172-191
GCCTCTAATGCTGCTCAATCTGCCAAGGAA172TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RS3F562TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
FD578787.1:175-194
GCCTCTAATGCTGCTCAATCTGCCAAGGAA175TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RS1H614TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD941869.1:178-197
GCCTCTAATGCTGCTCAATCTGCCAAGGAA178TCTTTGTCAGAGGGTGGACAGCAGTTGAAGCAGAAAGCACAGGGTGCGAC
RS3H675TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
FD958377.1:178-197
GCCTCTAATGCTGCTCAATCTGCCAAGGAA178TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RR1H392TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
FD965645.1:178-197
GCCTCTAATGCTGCTCAATCTGCCAAGGAA178TCTTTGTCAGAGGGTGGACAGCAGTTGGAGCAGAAAGCACAGGGTGCGAC
RR2GQ75TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD972504.1:176-195
GCCTCTAATGCTGCTCAATCTGCCAAGGAA176TCTTTGTCAGAGGGTGGACAGCCGCTGAAGCAGAAAGCACAGGGTGCGAC
RR2GW03TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD972962.1:175-194
GCCTCTAATGCTGCTCAATCTGCCAAGGAA175TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
RR4GS81TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
FD988889.1:171-190
GCCTCTAATGCTGCTCAATCTGCCAAGGAA171TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCGAC
13JKBNM2_UP_032_F10_28SEPT2007_070 13JKBNM2 Brassica napus cDNA 5', mRNA sequence.
GR436621.1:177-196
GCCTCCAATGCTGCCCAATCCGCCAAGGAA177TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
Brassica rapa clone S11 ABA-inducible protein-like protein mRNA, complete cds.
EU186321.1:118-137
GCCTCCAATGCTGCCCAATCCGCCAAGGAA118TCTTTGTCAGAGGGTGGACAGCAGCTGAAGCAGAAAGCACAGGGTGCCAC
Rattus norvegicus clone CH230-90M18, WORKING DRAFT SEQUENCE.
AC131473.4:135154-135173
TCTGCCCTCTCGCATCTGTGTCCTCTTTGT135154TCTTTGTCAGAGGGTGGACATGCTGGACAGCCAAAGCTGGCTGCTATTTA
Pandemis cinnamomeana genome assembly, chromosome: 6.
OW028708.1:13956232-13956251
TGACGCATCAAATAGCGGAGTAGGCGCGGT13956232TCTTTGTCAGAGGGTGGACAACGCTGAGAAGCCCATCGCATATTTGAGTC
Pandemis cinnamomeana genome assembly, chromosome: 18.
OW028720.1:7182043-7182062
TGACGCATCAAATAGCGGAGTAGGCGCGGT7182043TCTTTGTCAGAGGGTGGACAACGCTGAGAAGCCCATCGCATATTTGAGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTTTGTCAGAGGGTGGACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTTTGTCAGAGGGTGGACA | format : html | download : | debug :

0.017 | 0.017 | search_start;
3.060 | 3.043 | search_plus_done; http://172.18.8.135:50400/match?q=TCTTTGTCAGAGGGTGGACA&k=0&no_gap=0&offset=0&limit=50
3.220 | 0.160 | search_minus_done; http://172.18.8.135:50400/match?q=TGTCCACCCTCTGACAAAGA&k=0&no_gap=0&offset=0&limit=0
3.220 | 0.000 | cgi_end;

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