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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:17:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KR 1020110025451-A/25: A Method for Identifying Barley Varieties using Molecular Markers.
DI185942.1:1-21
1TGAAACCCATAGAGAGTGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR824632.1:485193329-485193349
TGGAACCAATTTGTTTGTGTGAAAAGTATT485193329TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828101.2:498347589-498347609
TGGAACCAATTTGTTTGTGTGAAAAGTATT498347589TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828115.1:477201038-477201058
TGGAACCAATTTGTTTGTGTGAAAAGTATT477201038TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828139.1:519990127-519990147
TGGAACCAATTTGTTTGTGTGAAAAGTATT519990127TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828146.2:486734929-486734949
TGGAACCAATTTGTTTGTGTGAAAAGTATT486734929TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828153.1:463499406-463499426
TGGAACCAATTTGTTTGTGTGAAAAGTATT463499406TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828160.1:497726121-497726141
TGGAACCAATTTGTTTGTGTGAAAAGTATT497726121TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828174.1:489264777-489264797
TGGAACCAATTTGTTTGTGTGAAAAGTATT489264777TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828188.1:488961691-488961711
TGGAACCAATTTGTTTGTGTGAAAAGTATT488961691TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828266.1:483720369-483720389
TGGAACCAATTTGTTTGTGTGAAAAGTATT483720369TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OU015681.1:492452428-492452448
TGGAACCAATTTGTTTGTGTGAAAAGTATT492452428TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OU701463.1:441329337-441329357
TGGAACCAATTTGTTTGTGTGAAAAGTATT441329337TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX459902.1:481687220-481687240
TGGAACCAATTTGTTTGTGTGAAAAGTATT481687220TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX459916.1:479916911-479916931
TGGAACCAATTTGTTTGTGTGAAAAGTATT479916911TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX459977.1:482917593-482917613
TGGAACCAATTTGTTTGTGTGAAAAGTATT482917593TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX459984.1:485203520-485203540
TGGAACCAATTTGTTTGTGTGAAAAGTATT485203520TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX459998.1:478687726-478687746
TGGAACCAATTTGTTTGTGTGAAAAGTATT478687726TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX460033.1:478506176-478506196
TGGAACCAATTTGTTTGTGTGAAAAGTATT478506176TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460054.1:480288542-480288562
TGGAACCAATTTGTTTGTGTGAAAAGTATT480288542TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460067.1:482416778-482416798
TGGAACCAATTTGTTTGTGTGAAAAGTATT482416778TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460075.1:482563966-482563986
TGGAACCAATTTGTTTGTGTGAAAAGTATT482563966TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460096.1:484538290-484538310
TGGAACCAATTTGTTTGTGTGAAAAGTATT484538290TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460110.1:485874098-485874118
TGGAACCAATTTGTTTGTGTGAAAAGTATT485874098TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460124.1:486172683-486172703
TGGAACCAATTTGTTTGTGTGAAAAGTATT486172683TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460159.1:480444962-480444982
TGGAACCAATTTGTTTGTGTGAAAAGTATT480444962TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460173.1:488486399-488486419
TGGAACCAATTTGTTTGTGTGAAAAGTATT488486399TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460180.1:480666310-480666330
TGGAACCAATTTGTTTGTGTGAAAAGTATT480666310TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460201.1:485274648-485274668
TGGAACCAATTTGTTTGTGTGAAAAGTATT485274648TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460222.1:483017682-483017702
TGGAACCAATTTGTTTGTGTGAAAAGTATT483017682TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460243.1:487383373-487383393
TGGAACCAATTTGTTTGTGTGAAAAGTATT487383373TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460264.1:483590852-483590872
TGGAACCAATTTGTTTGTGTGAAAAGTATT483590852TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460306.1:484950567-484950587
TGGAACCAATTTGTTTGTGTGAAAAGTATT484950567TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX638749.1:481573010-481573030
TGGAACCAATTTGTTTGTGTGAAAAGTATT481573010TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX638791.1:484960605-484960625
TGGAACCAATTTGTTTGTGTGAAAAGTATT484960605TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX638805.1:487046535-487046555
TGGAACCAATTTGTTTGTGTGAAAAGTATT487046535TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare genome assembly, chromosome: 1H.
OX638819.1:479481227-479481247
TGGAACCAATTTGTTTGTGTGAAAAGTATT479481227TGAAACCCATAGAGAGTGAGAGAGAGAAAGAGAGAGAGAGAGAAAGAGAGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
HG994374.1:446187425-446187445
TCTCTCTTTCTCTCTCTCTCTCTTTCTCTC446187425TCTCACTCTCTATGGGTTTCAAATACTTTTCACACAAACAAATTGGTTCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGAAACCCATAGAGAGTGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAAACCCATAGAGAGTGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.365 | 0.356 | search_plus_done; http://172.18.8.135:50400/match?q=TGAAACCCATAGAGAGTGAGA&k=0&no_gap=0&offset=0&limit=50
0.469 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCACTCTCTATGGGTTTCA&k=0&no_gap=0&offset=0&limit=13
0.470 | 0.001 | cgi_end;

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