GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 22:41:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Spinacia oleracea complete chloroplast genome.
AJ400848.1:45180-45203
CCCTAAATTAAAACTGAACTAAATGATAAA45180TGAAACGAAATCCCCTGAAATGTTGGATTTGGAAGTGTTGGATTCCAATGAAAT
Chenopodium album plastid, complete genome.
MF418659.1:44770-44793
CCCTAAATTAAAACTGAACTAAATGATAAA44770TGAAACGAAATCCCCTGAAATGTTGGATTTGGAAGTGTTGGATTCCAATGAAAT
UNVERIFIED: Spinacia turkestanica chloroplast sequence.
MZ516906.1:45194-45217
CCCTAAATTAAAACTGAACTAAATGATAAA45194TGAAACGAAATCCCCTGAAATGTTGGATTTGGAAGTGTTGGATTCCAATGAAAT
UNVERIFIED: Spinacia oleracea plastid sequence.
MZ516907.1:45186-45209
CCCTAAATTAAAACTGAACTAAATGATAAA45186TGAAACGAAATCCCCTGAAATGTTGGATTTGGAAGTGTTGGATTCCAATGAAAT
UNVERIFIED: Spinacia tetrandra chloroplast sequence.
MZ569012.1:45004-45027
CCCTAAATTAAAACTGAACTAAATGATAAA45004TGAAACGAAATCCCCTGAAATGTTGGATTTCGAAGTGTTGGATTCCAATGAAAT
Ipomoea triloba cultivar NCNSP0323 chromosome 13.
CP025672.1:16226521-16226544
ATTTCATTGGAATCCAACACTTCCAAATCC16226521AACATTTCAGGGGATTTCGTTTCATTTATCATTTAGTTCAGTTTTAATTTAGGG
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:191966368-191966391
ATTTCATTAGAATCCAACACTTCGAAATCC191966368AACATTTCAGGGGATTTCGTTTCATTTATCATTTAGTTCAGTTTTAATTTAGGG
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:195014890-195014913
ATTTCATTGGAATCCAACACTTCCAAATCC195014890AACATTTCAGGGGATTTCGTTTCATTTATCATTTAGTTCAGTTTTAATTTAGGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAAACGAAATCCCCTGAAATGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAAACGAAATCCCCTGAAATGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.125 | 0.117 | search_plus_done; http://172.18.8.135:50400/match?q=TGAAACGAAATCCCCTGAAATGTT&k=0&no_gap=0&offset=0&limit=50
0.159 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=AACATTTCAGGGGATTTCGTTTCA&k=0&no_gap=0&offset=0&limit=45
0.161 | 0.002 | cgi_end;

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