GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 14:36:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Bos taurus strain mammals genome assembly, chromosome: X.
OX344689.1:39313539-39313558
ATCTCATGTTGATTCAATTATTAGAATAGC39313539TGAAAGCACCTTTTGAGGGTAGAGGAAAATTCTTTTTGCCAACAAGTTAT
pOP-CNIP00019_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00019 5', mRNA sequence.
EY404552.1:616-635
TTTATTAACCTACTTGTCCATGCTTTTGGA616TGAAAGCACCTTTTGAGGGTTTTGAAGATTATGTGCACGTTGATGATCTA
Bos taurus clone CH240-392N5, WORKING DRAFT SEQUENCE, 27 unordered pieces.
AC221091.1:78358-78377
ATCTCATGTTGATTCAATTATTAGAATAGC78358TGAAAGCACCTTTTGAGGGTAGAGGAAAATTCTTTTTGCCAACAAGTTAT
Bos mutus isolate yakQH1 chromosome X.
CP027098.1:10233701-10233720
ATAACTTGTTGGCAAAAAGAATTTTCCTCT10233701ACCCTCAAAAGGTGCTTTCAGCTATTCTAATAATTGAATCAACATGAGAT
Cervus elaphus genome assembly, chromosome: X.
OU343077.1:49923215-49923234
TAACTTGTTGGCAAAGAAGAATTTTCCTCT49923215ACCCTCAAAAGGTGCTTTCAACTGTTCTAATAATCAAATCAACATGAGAC
Bos gaurus x Bos taurus genome assembly, chromosome: X.
OX258984.1:11366257-11366276
ATAACTTGTTGGCAAAAAGAATTTTCCTCT11366257ACCCTCAAAAGGTGCTTTCAGCTATTCTAATAATTGAATCAACATGAGAT
Rangifer tarandus platyrhyncus genome assembly, chromosome: X.
OX460343.1:131242146-131242165
TAACTTGTTGGCAAAGAAGAATTTTCCTCT131242146ACCCTCAAAAGGTGCTTTCAACTGTTCTAATAATCAAATCAACATGAGAT
Bos taurus genome assembly, chromosome: BtaX.
OY997258.1:11490339-11490358
ATAACTTGTTGGCAAAAAGAATTTTCCTCT11490339ACCCTCAAAAGGTGCTTTCAGCTATTCTAATAATTGAATCAACATGAGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAAAGCACCTTTTGAGGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAAAGCACCTTTTGAGGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.158 | 0.149 | search_plus_done; http://172.18.8.135:50400/match?q=TGAAAGCACCTTTTGAGGGT&k=0&no_gap=0&offset=0&limit=50
0.176 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=ACCCTCAAAAGGTGCTTTCA&k=0&no_gap=0&offset=0&limit=47
0.180 | 0.003 | cgi_end;

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