GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 18:34:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sciurus carolinensis genome assembly, chromosome: 6.
LR738595.1:103833024-103833041
GAATCTTTTTGTTTACTGGATGCAGAATCA103833024TGAAGGTATGGGTTATGGTTCAGATATGAGTTGTCCCCGAAAAGCTCA
Sarcophilus harrisii genome assembly, chromosome: 4.
LR735557.1:174777174-174777191
TTTATGACCCCTACTAGACTTTAAGATTCT174777174TGAAGGTATGGGTTATGGCTTATTTATGTTTATGTCTATTCCCCTCCA
Martes martes genome assembly, chromosome: 18.
OY734081.1:22668279-22668296
ACGAAGCTCTACTTTGCAAAATGTTGTCTA22668279TGAAGGTATGGGTTATGGGTTGAATTGTGTCCCCATAAAAGATGCTGA
Acipenser ruthenus genome assembly, chromosome: 7.
OV737688.1:6295743-6295760
ATGCTATTCCTATTATATAATAATCACCAC6295743TGAAGGTATGGGTTATGGGTTTAGATATAAACATGTTATATATTTGAG
Acipenser ruthenus genome assembly, chromosome: 7.
OV754676.1:6303073-6303090
ATGCTATTCCTATTATATAATAATCACCAC6303073TGAAGGTATGGGTTATGGGTTTAGATATAAACATGTTATATATTTGAG
Bacillus phage 2S-4, complete genome.
ON133270.1:66058-66075
TGAACCTTATAGAATCAACTGGACTGATAT66058TGAAGGTATGGGTTATGGATGGGCATGGATGAATTATGACGAAAAAGA
JP 2014500723-A/12972: Polycomb-Associated Non-Coding RNAs.
LF205469.1:787-804
ATCTGCCAAAGGCCAGGGAAACTGTCCAGG787TGAAGGTATGGGTTATGGGTTAGAATAGTGACAGGTGAGAGTGGGAAG
JP 2018138019-A/12972: Polycomb-Associated Non-Coding RNAs.
MA441046.1:787-804
ATCTGCCAAAGGCCAGGGAAACTGTCCAGG787TGAAGGTATGGGTTATGGGTTAGAATAGTGACAGGTGAGAGTGGGAAG
Sequence 12972 from patent US 10119144.
MM233813.1:787-804
ATCTGCCAAAGGCCAGGGAAACTGTCCAGG787TGAAGGTATGGGTTATGGGTTAGAATAGTGACAGGTGAGAGTGGGAAG
CBTY2837.b1 B.anynana_embryo_nosize Bicyclus anynana cDNA clone CBTY2837, mRNA sequence.
GE676772.1:264-281
GTTGACTGTTGAAGAATACCAGCCATATCC264TGAAGGTATGGGTTATGGGGACTATCCTAAATTGCCGGACATTGGAAC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB085J21, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.
AC232529.1:108243-108260
AAGGTGATGCTTTTGAAAACGAATGTGTGA108243TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB085J21, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.
AC232529.1:122496-122513
AAGGTGATGCTTTTGAAAACGAATGTGTGA122496TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:24712084-24712101
AAGGTGATGGTTTTGAAAACGAATGTGTGA24712084TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:24726346-24726363
AAGGTGATGCTTTTGAAAACGAATGTGTGA24726346TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica napus genome assembly, chromosome: A03.
HG994357.1:24865400-24865417
AAGGTGATGGTTTTGAAAACGAATGTGTGA24865400TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica napus genome assembly, chromosome: C07.
HG994371.1:48569347-48569364
AAGGTGATGGTTTTGAAAACGAAGTTGTGA48569347TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica rapa genome, scaffold: A03.
LR031572.1:24316501-24316518
AAGGTGATGGTTTTGAAAACGAATGTGTGA24316501TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica rapa genome, scaffold: A03.
LR031572.1:24324548-24324565
AAGGTGATGGTTTTGAAAACGAAGTTGTGA24324548TGAAGGTATGGGTTATGGAAGATGCTGAGACGAATCTGTGGTCGAGTA
Brassica rapa genome, scaffold: A03.
LR031572.1:24356889-24356906
AAGGTGATGCTTTTGAAAACGAATGTGTGA24356889TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Raphanus sativus genome assembly, chromosome: 2.
LR778311.1:47944638-47944655
AAGGTGATGGTTTTGAAAACGAAAGTGTGA47944638TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTC
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:24444375-24444392
AAGGTGATGGTTTTGAAAACGAATGTGTGA24444375TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:24452422-24452439
AAGGTGATGGTTTTGAAAACGAAGTTGTGA24452422TGAAGGTATGGGTTATGGAAGATGCTGAGACGAATCTGTGGTCGAGTA
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:24484765-24484782
AAGGTGATGCTTTTGAAAACGAATGTGTGA24484765TGAAGGTATGGGTTATGGAAGATGCAGAGACGAATCTGTGGTCGAGTA
Sambucus nigra genome assembly, chromosome: 9.
OX422215.1:570774098-570774115
TTATTTGTCATAGTTGTGATATGCTATTTC570774098TGAAGGTATGGGTTATGGATATTTAAAAAATGAATAAAGGCCCCTCTC
Inga oerstediana genome assembly, chromosome: 12.
OY723410.1:44448846-44448863
TTCCTCTGTATGAGTGGGGGAAGGAATAGG44448846TGAAGGTATGGGTTATGGTTGTGCTCTGGGTGGTGAATCCTCAATAAT
Inga oerstediana genome assembly, chromosome: 13.
OY723411.1:36827836-36827853
TTCCTCTGTATGAGTGGGGGAAGGAATAGG36827836TGAAGGTATGGGTTATGGCTGTGCTCTGGGTGGTGAATCCTCAATGGT
Methanohalophilus mahii DSM 5219, complete genome.
CP001994.1:63009-63026
ATGTTGAAAAGCCGGCACATGATATGGAGG63009TGAAGGTATGGGTTATGGCATCATAAGCGTTCAATCCTGCAAAGTAAA
Paraburkholderia phytofirmans OLGA172 chromosome 1, complete sequence.
CP014578.1:4111156-4111173
CCATTGGCTGTTCCGGCTGGTGCGCGGCGT4111156TGAAGGTATGGGTTATGGCGATTTCAAACTGCTGGCTGCACTCGGCGC
Methanohalophilus portucalensis strain FDF-1T chromosome, partial genome.
CP017881.1:1006072-1006089
ATGTCGAGAACCCTGCACATGATATGGAAG1006072TGAAGGTATGGGTTATGGCATCGTAAGCATTCAGTCCTGCGAAATACA
Bacillus amyloliquefaciens strain CQN-2 plasmid unnamed, complete sequence.
CP076118.1:39338-39355
TGAACCTTATAGAATCAACTGGACTGATAT39338TGAAGGTATGGGTTATGGATGGGCATGGATGAATTATGACGAAAAAGA
Bacillus subtilis strain 23-1 plasmid unnamed1, complete sequence.
CP106792.1:28810-28827
TGACCCTTATAGAATCAACTGGACTGATAT28810TGAAGGTATGGGTTATGGATGGGCATGGATGAATTATGACGAAAAAGA
Crassostrea gigas strain QD chromosome 6.
CP048844.1:37860801-37860818
AGAGGGGGTGATAGAGGAAGGGTAAGTCAA37860801TGAAGGTATGGGTTATGGAGGAAGGGAAGATCAATGAAGGAATGGGTT
Macrobrachium nipponense isolate FS-2020 chromosome 2.
CP062027.1:153185912-153185929
ATTAAAGAAATATAAAATCAAAGATGGAAA153185912TGAAGGTATGGGTTATGGTTCTCGAAACAATGTTTGTTGAATGATTCC
Laspeyria flexula genome assembly, chromosome: 12.
LR989961.1:12853076-12853093
CTGTGAAATTGATAGTGGGAATCTTCGTTA12853076TGAAGGTATGGGTTATGGGAATTATTGACTGGGGACTTTAGATATTGT
Tachina fera genome assembly, chromosome: 5.
LR999967.1:32621836-32621853
TGAATGGTATACGGACTGCTCCAAAACACA32621836TGAAGGTATGGGTTATGGAGTCTTTTCGAGGGCCTTAGGTCTTTGTAT
Mythimna ferrago genome assembly, chromosome: 9.
OU342682.1:9522915-9522932
CGATCGATCTGATTTGGAAGTGCATCTTAT9522915TGAAGGTATGGGTTATGGTTCTAGTCTTTTCTTTATTTAGTCGTAAAG
Erebia ligea genome assembly, chromosome: 20.
OU785239.1:4332444-4332461
AAAAACAGACACACTCGCATTTATAATCTA4332444TGAAGGTATGGGTTATGGATACTTAATTTTTAAAAAATTCAGCACTTC
Diatraea saccharalis genome assembly, chromosome: 16.
OU893347.1:2043021-2043038
AGCACCACAACACAGACAATATTTAAGTTT2043021TGAAGGTATGGGTTATGGTACACCATTCCAACGTCAAAAGCAGTGGGC
Eupithecia exiguata genome assembly, chromosome: 29.
OX352255.1:778827-778844
TCTTGAGTTGGCACGCGTTCTTCTATAAAT778827TGAAGGTATGGGTTATGGAATTTCACAGGTTCCGGGTTTTTTACCCTT
Megachile leachella genome assembly, chromosome: 5.
OY756251.1:15078835-15078852
CATATAGTTAGATGGTCATTTACTAGTTTT15078835TGAAGGTATGGGTTATGGCAGAGGTTAAATGCATGTGAGCATGCCTGT
Human DNA sequence from clone RP11-536C5 on chromosome 1q23.1-24.1.
AL121987.34:155856-155873
CTTCCCACTCTCACCTGTCACTATTCTAAC155856CCATAACCCATACCTTCACCTGGACAGTTTCCCTGGCCTTTGGCAGAT
Heterocephalus glaber genome assembly, chromosome: 27.
OX090967.1:4400339-4400356
TTCTCTTGGCCTTTACTCTTCCTCCTCCCA4400339CCATAACCCATACCTTCAGTCTATTCTTCAGAGAGCAGTTGATAGTTA
Heterocephalus glaber genome assembly, chromosome: 26.
OZ001134.1:4400339-4400356
TTCTCTTGGCCTTTACTCTTCCTCCTCCCA4400339CCATAACCCATACCTTCAGTCTATTCTTCAGAGAGCAGTTGATAGTTA
Felis catus Senzu DNA, chromosome: B1, American Shorthair breed.
AP023155.1:94645701-94645718
AATTCATACCTAGATAATTCTCAGTTTTTA94645701CCATAACCCATACCTTCAAGCCTCTCCTTTTTTTTTTTTTTTAATGTT
Sarcophilus harrisii genome assembly, chromosome: X.
LR735560.1:31615668-31615685
AGTGGTCACCCAGCTCATCAACCTTTAAGT31615668CCATAACCCATACCTTCACCTCAATGAGCAACAACAACAAAATACACC
Lutra lutra genome assembly, chromosome: 18.
LR738420.1:22028418-22028435
TCAGCATCTTTTATGGGGACACAATTCAAC22028418CCATAACCCATACCTTCATGGACAACATTTTGCAAAGTAGAGCTTCGT
Plecotus auritus genome assembly, chromosome: 9.
OY734030.1:117665484-117665501
AATAATTTACCCATACCTAATTTACTCATA117665484CCATAACCCATACCTTCAATATTTTAAGAAATTACATTAATGTTTTTA
Bacillus phage FADO, complete genome.
OM236516.1:164428-164445
TCTTTTTCGTCATAATTCATCCATGCCCAT164428CCATAACCCATACCTTCAATATCAGTCCAGTTGATTCTATAAGGGTCA
Bacillus phage vB_BsuS_PJN02, complete genome.
OM634653.1:105816-105833
TCTTTTTCGTCATAATTCATCCATGCCCAT105816CCATAACCCATACCTTCAATATCAGTCCAGTTGATTCTATAAGGGTCA
Bacillus phage PK-3, complete genome.
ON881243.1:98021-98038
TCTTTTTCGTCATAATTCATCCATGCCCAT98021CCATAACCCATACCTTCAATATCAGTCCAGTTGATTCTATAAGGGTCA
Sequence 497 from Patent EP2097538.
JA017293.1:645-662
CTTCCCACTCTCACCTGTCACTATTCTAAC645CCATAACCCATACCTTCACCTGGACAGTTTCCCTGGCCTTTGGCAGAT
Bacteroidales bacterium isolate 02c7b626-391e-4885-bdde-2c12926d4a43 genome assembly, chromosome: 22.
OY782153.1:38113-38130
GCGATAGGGATGCCGCATTTTCCCATATTG38113CCATAACCCATACCTTCAAAAGGAGCGGCGAACACCAGTTCGGGAGCA
Eukaryotic synthetic construct chromosome 1.
CP034487.1:160160873-160160890
CTTCCCACTCTCACCTGTCACTATTCTAAC160160873CCATAACCCATACCTTCACCTGGACAGTTTCCCTGGCCTTTGGCAGAT
Eukaryotic synthetic construct chromosome 1.
CP034512.1:160160873-160160890
CTTCCCACTCTCACCTGTCACTATTCTAAC160160873CCATAACCCATACCTTCACCTGGACAGTTTCCCTGGCCTTTGGCAGAT
CBTY2837.g1 B.anynana_embryo_nosize Bicyclus anynana cDNA clone CBTY2837, mRNA sequence.
GE676774.1:365-382
GTTCCAATGTCCGGCAATTTAGGATAGTCC365CCATAACCCATACCTTCAGGATATGGCTGGTATTCTTCAACAGTCAAC
KBrB085J21R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB085J21, genomic survey sequence.
DX074826.1:621-638
TACTCGACCACAGATTCGTCTCTGCGTCTT621CCATAACCCATACCTTCATCACACATTCGTTTTCAAAAGCATCACCTT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH039L17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC241126.1:38330-38347
TACTCGACCACAGATTCGTCTCTGCATCTT38330CCATAACCCATACCTTCATCACACATTCGTTTTCAAAAGCATCACCTT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH039L17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC241126.1:52585-52602
TACTCGACCACAGATTCGTCTCTGCATCTT52585CCATAACCCATACCTTCATCACACATTCGTTTTCAAAAGCATCACCTT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143388.1:21122749-21122766
GTCGAGGCCACACGATCCGCTGCCCGCCAC21122749CCATAACCCATACCTTCACAACCCGTACCCACACACCCAACATCAAAC
Ailanthus altissima genome assembly, chromosome: 7.
OX327689.1:28699809-28699826
GCAAAAAGAGTCTACGGCCCTTTAGAGAAG28699809CCATAACCCATACCTTCACCCTGCAGGCCTTACCAGCACGTACAACAA
Viscum album genome assembly, chromosome: 1_6.
OY728124.1:94512547-94512564
TATTGGGTCATAAGGCACATCACATCCATA94512547CCATAACCCATACCTTCACATTAGGATACATGAGAACTGGGTTTGGTA
Raphanus sativus genome assembly, chromosome: 4.
OY743210.1:5705865-5705882
GACTCGACCACAGATTCGTCTCTGCATCTT5705865CCATAACCCATACCTTCATCACACTTTCGTTTTCAAAACCATCACCTT
Viola odorata genome assembly, chromosome: 6.
OY829542.1:46174968-46174985
ATGTCCTCGACCTCCCGAAGGAGTACGGTT46174968CCATAACCCATACCTTCAACGTCAATGATTTATAACTTTGCCATGAAG
Methanohalophilus halophilus strain Z-7982 chromosome, complete genome.
CP017921.1:629265-629282
TGTATTTGGCAGGATTGAACGCTTACGATG629265CCATAACCCATACCTTCACCTCCATATCATGTGCCGGGTTTTCAACGT
Chilo suppressalis genome assembly, chromosome: 11.
OU963904.1:24124237-24124254
GCCCATTGCTTTTGTCGCTGAAATGGGGTT24124237CCATAACCCATACCTTCAAAACTTAAGTACTGTCTATGTTGTGGTGCT
Tachina lurida genome assembly, chromosome: 1.
OX101752.1:100155112-100155129
ATACGACGACCTAGAGCCCTCGAAAAGACT100155112CCATAACCCATACCTTCATGGAGTTCCATTCATCCACAATTCTGTGGA
Tachina lurida genome assembly, chromosome: 1.
OX101752.1:112752809-112752826
ATACAAAGACTTAAAGCCCTCGAAAATACT112752809CCATAACCCATACCTTCATGTGTTTTGGAGCCGTCCGTATAAAAATCA
Tachina lurida genome assembly, chromosome: 2.
OX101753.1:119523437-119523454
ATACGAAGACTTAAAGCCTTCGAGAATACT119523437CCATAACCCATACCTTCATGTGTTTTGGAGCCGTTCGTATAAAAATCC
Amphiduros pacificus genome assembly, chromosome: 9.
OX439008.1:19837288-19837305
TTATAGTTATAGTTGTTATTAGTCATGCAG19837288CCATAACCCATACCTTCAATAGGTTGATAATGCGTTTTAACCTGAGAA
Leucophora obtusa genome assembly, chromosome: 5.
OX465299.1:5203866-5203883
ATTTAAATAGTGATAATATTTGGAAACAAA5203866CCATAACCCATACCTTCACATTTAATATTACATATCCCACCTTTTCTT
Limnephilus auricula genome assembly, chromosome: 1.
OX638388.1:41789068-41789085
TCAAAAACTAGACAGAATTCAGAGCGAAAC41789068CCATAACCCATACCTTCAGAAAATCACAGTACATATATATCTATAAAT
Trididemnum clinides genome assembly, chromosome: 14.
OY776297.1:9073894-9073911
CAAAGTCAAACGGAAATTCATCAGAGGAAG9073894CCATAACCCATACCTTCATAACAGATCTGATCGGCTTTCCGCGTATGC
Fragum sueziense genome assembly, chromosome: 2.
OY804593.1:73114220-73114237
GCAAGTAGATAAAATGTTATATCCAATGAA73114220CCATAACCCATACCTTCAAAATGACACTTTTTGAAAAGATAAAAGCTT
Sepia lycidas genome assembly, chromosome: 7.
OZ010577.1:42244014-42244031
CAGTCCCCTTGTTTAAGTTGGTGAATGTTG42244014CCATAACCCATACCTTCAGTTAATCTTTAGTGTTACAAGGAGTTTTCT
Sepia lycidas genome assembly, chromosome: 30.
OZ010600.1:28630261-28630278
ACAGTCTCCTTGTTTAATTTCGTGAATGCA28630261CCATAACCCATACCTTCAGTTCATCTTTGGTGTTCCAACGAGTTTTGG
Sepia lycidas genome assembly, chromosome: 36.
OZ010606.1:23904412-23904429
TGGTCTCCTTGTTTAAGTTGGTGAATGCTG23904412CCATAACCCATACCTTCAGTTCATCTTTGATGTTACAAGGAGTTTTGT

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