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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 04:52:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Erithacus rubecula genome assembly, chromosome: 6.
LR812108.1:55097711-55097730
ATTACAACACAGTGATGTACTAAAAGTTTA55097711TGACATCAGGATGGTACTGGAACTTTAGAAAGTAGACCTGCAAGTGGTCT
Cinclus cinclus genome assembly, chromosome: 6.
OY759683.1:56826694-56826713
ATTACAACACAGTAATATACCAGAAGTATA56826694TGACATCAGGATGGTACTGGAACTTTAGAAAGTAGACCTGCAAGTGGTCT
Sequence 2974 from patent US 7750207.
GX308899.1:1608-1627
TAAACTTTTCGGTCGCTCCCGGCTCCTTAT1608TGACATCAGGATGGTACTGGCGCGCGAGCTTCCGGTACGCGGCCTTGATG
Lotus japonicus genomic DNA, chromosome 3, clone: LjT23O13, TM0793.
AP010087.1:5755-5774
TGAACTTATCAGTGGCACCAGGTTCCTTGT5755TGACATCAGGATGGTACTGGAGAAAGATAAACACGAAATGATATTAGGTT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:913799-913818
TGAACTTATCAGTGGCACCAGGTTCCTTGT913799TGACATCAGGATGGTACTGGAGAAAGATAAACACGAAATGATATTAGGTT
Calonectria ilicicola strain GDYJ169 chromosome 4.
CP085828.1:1093600-1093619
CGATCAGGATATAGTAAGGACCCCGCCATC1093600TGACATCAGGATGGTACTGGAGAAATGAGCGCGAAGTAACGGGTGCGAGG
Serratia symbiotica strain CWBI-2.3 chromosome, complete genome.
CP050855.1:3004973-3004992
TGAACTTGCTTTCAGCATCCTTCTCAGTAC3004973TGACATCAGGATGGTACTGGCGCGCCAGTCGGCGGTAGGCGGTTTTTATG
Serratia symbiotica strain 24.1 chromosome, complete genome.
CP072652.1:2705726-2705745
TGAACTTGCTTTCAGCATCCTTCTCAGTAC2705726TGACATCAGGATGGTACTGGCGCGCCAGTCGGCGGTAGGCGGTTTTTATG
Cordylochernes scorpioides isolate IN4F17 chromosome 01.
CP092863.1:95796856-95796875
GGACGAACAGTTGGTGCTGACTGGGGGAGC95796856TGACATCAGGATGGTACTGGAGACACACAGGTAATGGCGGCAGCACATCT
Peromyscus eremicus genome assembly, chromosome: 8a.
OX460401.1:50678431-50678450
AACAGTGACAATCAGGGTCATTTCATGAGG50678431CCAGTACCATCCTGATGTCAAAACAAAGTTATAGGCCTGTCTCAATCATG
Peromyscus eremicus genome assembly, chromosome: 8a.
OX460473.1:49641043-49641062
AACAGTGACAATCAGGGTCATTTCATGAGG49641043CCAGTACCATCCTGATGTCAAAACAAAGTTATAGGCCTGTCTCAATCATG
Sequence 8824 from patent US 7834146.
GX740645.1:366-385
CATCAAGGCCGCGTACCGGAAGCTCGCGCG366CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
Sequence 8824 from patent US 8106174.
GZ083516.1:366-385
CATCAAGGCCGCGTACCGGAAGCTCGCGCG366CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
Sequence 17798 from patent US 8362325.
GZ769942.1:303-322
CATCAAGGCCGCGTACCGGAAGCTCGCGCG303CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
JP 2005185101-A/18405: Full length cDNA of plant and the use thereof.
HV083527.1:335-354
CATCAAGGCCGCCTACCGGAAGCTTGCGCG335CCAGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCA
Sequence 17798 from patent US 9701726.
KH862109.1:303-322
CATCAAGGCCGCGTACCGGAAGCTCGCGCG303CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
Sequence 5872 from patent US 9834782.
MI328196.1:449-468
CATCAAGGCCGCCTACCGGAAGCTTGCGCG449CCAGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCA
Sequence 5874 from patent US 9834782.
MI328198.1:363-382
CATCAAGGCCGCCTACCGGAAGCTTGCGCG363CCAGTACCATCCTGATGTCAACAAGGAGCCTGGAGCAACTGAAAAATTTA
Sequence 5875 from patent US 9834782.
MI328199.1:453-472
CATCAAGGCCGCGTACCGGAAGCTCGCGCG453CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
PIC1_18_B06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum bicolor cDNA, mRNA sequence.
BM323335.1:155-174
CATCAAGGCCGCGTACCGGAAGCTCGCGCG155CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
HS1_20_F08.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_20_F08_A012 5', mRNA sequence.
CD206146.1:364-383
CATCAAGGCCGCGTACCGGAAGCTCGCGCG364CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
HS1_49_E08.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_49_E08_A012 5', mRNA sequence.
CD210753.1:335-354
CATCAAGGCCGCGTACCGGAAGCTCGCGCG335CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
SS1_11_E03.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone SS1_11_E03_A012 5', mRNA sequence.
CD233086.1:366-385
CATCAAGGCCGCGTACCGGAAGCTCGCGCG366CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAGAAGTTTA
NIT1_25_B03.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA clone NIT1_25_B03_A002 5', mRNA sequence.
CF433242.1:333-352
CATCAAGGCCGCGTACCGGAAGCTCGCGCG333CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
26218rsicef_12918.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica Group cDNA 5', mRNA sequence.
CK012461.1:340-359
CATCAAGGCCGCCTACCGGAAGCTTGCGCG340CCAGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCA
80361rsicen_5581.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indica Group cDNA 5', mRNA sequence.
CK082341.1:318-337
CATCAAGGCCGCCTACCGGAAGCTTGCGCG318CCAGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCA
OX1_19_G03.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_19_G03_A002 5', mRNA sequence.
CN134034.1:376-395
CATCAAGGCCGCGTACCGGAAGCTCGCGCG376CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
Oryza sativa Indica Group EST sequence:OSIGCPI206K21.
CT853969.1:380-399
CATCAAAGCCGCCTACCGGAAGCTTGCGCG380CCAGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCA
GABR1_56_B03.g1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_56_B03_A002 5', mRNA sequence.
CX621175.1:353-372
CATCAAGGCCGCGTACCGGAAGCTCGCGCG353CCAGTACCATCCTGATGTCAATAAGGAGCCTGGAGCAACCGAAAAGTTTA
EST1126862 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1P337, mRNA sequence.
DR935323.1:505-524
TATTAAAGCCGCTTATCGCAAATTAGCACG505CCAGTACCATCCTGATGTCAACAAGCAACCTGGAGCAACAGAAAAGTTTA
EST1136276 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1QO58, mRNA sequence.
DR944737.1:395-414
TATTAAAGCCGCTTATCGCAAATTAGCACG395CCAGTACCATCCTGATGTCAACAAGCAACCTGGAGCAACAGAAAAGTTTA
EST1161928 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1SJ71, mRNA sequence.
DT728078.1:331-350
TATTAAAGCCGCTTATCGCAAATTAGCACG331CCAGTACCATCCTGATGTCAACAAGCAACCTGGAGCAACAGAAAAGTTTA
EST1168391 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1TS37, mRNA sequence.
DT734541.1:387-406
TATTAAAGCCGCTTATCGCAAATTAGCACG387CCAGTACCATCCTGATGTCAACAAGCAACCTGGAGCAACAGAAAAGTTTA
EST1193621 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1YA78, mRNA sequence.
DT759772.1:331-350
TATTAAAGCCGCTTATCGCAAATTAGCACG331CCAGTACCATCCTGATGTCAACAAGCAACCTGGAGCAACAGAAAAGTTTA
1734476 CERES-226 Zea mays cDNA clone 386755 5', mRNA sequence.
FK968943.1:334-353
CATCAAGGCCGCGTACCGGAAGCTCGCGCG334CCAGTACCATCCTGATGTCAATAAGGAGCCGGGAGCGA
25387125 CERES-505 Zea mays cDNA clone 1666363 5', mRNA sequence.
FL130079.1:359-378
CATCAAGGCCGCATACCGGAAGCTCGCGCG359CCAGTACCATCCTGATGTCAATAAGGAGCCGGGAGCGACCGAAAAGTTTA
MNESC1NG-T3-003_E23_08FEB2009_092 MNESC1NG cell culture from Mahonia nervosa Berberis nervosa cDNA, mRNA sequence.
JG620297.1:198-217
TATCAAAGCCGCCTACCGAAGGTTGGCACG198CCAGTACCATCCTGATGTCAATAAGCAACCTGGAGCAACCGAAAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq12.
LA482962.1:2836-2855
AATTAAGGCTGCTTATCGAAGATTAGCTCG2836CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq16.
LA482966.1:2836-2855
AATTAAGGCTGCTTATCGAAGATTAGCTCG2836CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq17.
LA482967.1:3129-3148
AATTAAGGCTGCTTATCGAAGATTAGCTCG3129CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq18.
LA482968.1:2836-2855
AATTAAGGCTGCTTATCGAAGATTAGCTCG2836CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq23.
LA482972.1:2579-2598
AATTAAGGCTGCTTATCGAAGATTAGCTCG2579CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq25.
LA482974.1:1773-1792
AATTAAGGCTGCTTATCGAAGATTAGCTCG1773CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq29.
LA482978.1:2579-2598
AATTAAGGCTGCTTATCGAAGATTAGCTCG2579CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq44.
LA482993.1:3129-3148
AATTAAGGCTGCTTATCGAAGATTAGCTCG3129CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq47.
LA482996.1:2579-2598
AATTAAGGCTGCTTATCGAAGATTAGCTCG2579CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq53.
LA483002.1:2872-2891
AATTAAGGCTGCTTATCGAAGATTAGCTCG2872CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq58.
LA483007.1:3129-3148
AATTAAGGCTGCTTATCGAAGATTAGCTCG3129CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq59.
LA483008.1:2579-2598
AATTAAGGCTGCTTATCGAAGATTAGCTCG2579CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq60.
LA483009.1:3129-3148
AATTAAGGCTGCTTATCGAAGATTAGCTCG3129CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq63.
LA483011.1:2872-2891
AATTAAGGCTGCTTATCGAAGATTAGCTCG2872CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq65.
LA483013.1:2836-2855
AATTAAGGCTGCTTATCGAAGATTAGCTCG2836CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq67.
LA483015.1:3129-3148
AATTAAGGCTGCTTATCGAAGATTAGCTCG3129CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq71.
LA483019.1:2836-2855
AATTAAGGCTGCTTATCGAAGATTAGCTCG2836CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp288378_c0_seq76.
LA483024.1:1773-1792
AATTAAGGCTGCTTATCGAAGATTAGCTCG1773CCAGTACCATCCTGATGTCAACAAGCAACCCGGAGCAACTGAGAAGTTTA
Oryza sativa Japonica Group cDNA clone:J013160I05, full insert sequence.
AK068801.1:335-354
CATCAAGGCCGCCTACCGGAAGCTTGCGCG335CCAGTACCATCCTGATGTCAATAAGGAACCTGGAGCAACCGATAAGTTCA
Zea mays clone 386755 chaperone protein dnaJ mRNA, complete cds.
EU972724.1:334-353
CATCAAGGCCGCGTACCGGAAGCTCGCGCG334CCAGTACCATCCTGATGTCAATAAGGAGCCGGGAGCGACCGAAAAGTTTA
Serratia symbiotica IS DNA, complete genome.
AP019531.1:724961-724980
CATAAAAACCGCCTACCGCCGACTGGCGCG724961CCAGTACCATCCTGATGTCAGTACTGAGAAGAATGCTGAAAGCAAGTTCA
Cordylochernes scorpioides isolate IN4F17 chromosome 01.
CP092863.1:95707661-95707680
AGATGTGCTGCCGCCATTACCTGTGTGTCT95707661CCAGTACCATCCTGATGTCAGCTCCCCCAGTCAGCACCAACTGTTCGTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGACATCAGGATGGTACTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGACATCAGGATGGTACTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.436 | 0.427 | search_plus_done; http://172.18.8.135:50400/match?q=TGACATCAGGATGGTACTGG&k=0&no_gap=0&offset=0&limit=50
2.045 | 1.610 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGTACCATCCTGATGTCA&k=0&no_gap=0&offset=0&limit=41
2.080 | 0.034 | cgi_end;

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