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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 21:16:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS3C781TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EX904382.1:676-697
ATGATTCTTTATGGATGTTTCCCATTGCGG676TGACGTGTGGCAATACCTTTGTCTTAAGCATCG
RS1DB74TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EY930517.1:424-445
TGCACACTAAAGTGATGTTTCCCATTGCGG424TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
RS1E157TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EY932810.1:207-228
TGATTCCTTTATGGATGTTTCCCATTGCGG207TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTTC
RS2DC33TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY937799.1:640-661
TGATTCCTTTATGGATGTTTCCCATTGCGG640TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGA
RS2EH26TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY941353.1:679-700
TGATTCCTTTATGGATGTTTCCCATTGCGG679TGACGTGTGGCAATACCTTTGTCTTAAGCCATCGGAGATGATCCTGGTGCTT
RS3FM13TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
FD580223.1:678-699
TGATTCCTTTATGGATGTTTCCCATTGCGG678TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGATCCTGGTGCT
RS1GY68TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD941230.1:596-617
TGATTCCTTTATGGATGTTTCCCATTGCGG596TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGATCCTGGTGCT
RS2GY57TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD948423.1:600-621
TGATTCCTTTATGGATGTTTCCCATTGCGG600TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAAGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCF15O13, 5' end sequence.
FY431842.1:641-662
TGATTCCTTTATGGATGTTTCCCATTGCGG641TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCL13B08, 5' end sequence.
FY437202.1:623-644
TGATTCCTTTATGGATGTTTCCCATTGCGG623TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS03A17, 5' end sequence.
FY446900.1:208-229
TGATTCCTTTATGGATGTTTCCCATTGCGG208TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS03M23, 5' end sequence.
FY447167.1:114-135
TGATTCCTTTATGGATGTTTCCCATTGCGG114TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS04J03, 5' end sequence.
FY447414.1:570-591
TGATTCCTTTATGGATGTTTCCCATTGCGG570TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS05B16, 5' end sequence.
FY447595.1:547-568
TGATTCCTTTATGGATGTTTCCCATTGCGG547TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS12G07, 5' end sequence.
FY450150.1:412-433
TGATTCCTTTATGGATGTTTCCCATTGCGG412TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS14J21, 5' end sequence.
FY450942.1:300-321
TGATTCCTTTATGGATGTTTCCCATTGCGG300TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS15B02, 5' end sequence.
FY451105.1:557-578
TGATTCCTTTATGGATGTTTCCCATTGCGG557TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS18C24, 5' end sequence.
FY452216.1:547-568
TGATTCCTTTATGGATGTTTCCCATTGCGG547TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS20P19, 5' end sequence.
FY453234.1:280-301
TGATTCCTTTATGGATGTTTCCCATTGCGG280TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Raphanus sativus mRNA, clone: RSCS22H08, 5' end sequence.
FY453755.1:521-542
TGATTCCTTTATGGATGTTTCCCATTGCGG521TGACGTGTGGCAATACCTTTGTCTTAAAGCCATCGGAGAAGGATCCTGGTGC
Apamea monoglypha genome assembly, chromosome: 16.
OU426930.1:14278279-14278300
AAAGAAACAATAAAATCGAAAATTGTGTAT14278279TGACGTGTGGCAATACCTTTGTGATGCCTGAGAAATTTTGGGATTCCTTTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGACGTGTGGCAATACCTTTGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGACGTGTGGCAATACCTTTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.913 | 1.905 | search_plus_done; http://172.18.8.135:50400/match?q=TGACGTGTGGCAATACCTTTGT&k=0&no_gap=0&offset=0&limit=50
2.025 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=ACAAAGGTATTGCCACACGTCA&k=0&no_gap=0&offset=0&limit=29
2.025 | 0.000 | cgi_end;

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