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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:24:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KS01051H12 KS01 Capsicum annuum cDNA, mRNA sequence.
BM063133.1:9-28
AATTTTGA9TGACTGGAAAATGGAACGAATCTATAAGTTATCAACCCTGTGATATGGAA
73598.1 Cold Sweetening B Solanum tuberosum cDNA clone 73598 5', mRNA sequence.
CV495948.1:47-66
ACAACAGTGAGGAAGAACCCAAAATTTTGA47TGACTGGAAAATGGAACGAATCTATAAGTTATCAACCCTGTGATTTGGAA
SSBN003O14u SSBN Solanum tuberosum cDNA clone SSBN003O14, mRNA sequence.
EG011866.1:363-382
ACAACAGTGAGGAGGAACCCAAAATTTTGA363TGACTGGAAAATGGAACGAATCTATAAGTTATCAACCCTGTGATTTGGAA
Ncdx098H12 NCdx Neolamarckia cadamba cDNA, mRNA sequence.
JZ545499.1:194-213
ATAATGCTGCCGAGGAACCCAAGATATTGA194TGACTGGAAAATGGAACGAAGTAATGAGTTATCAACCGTGCGACATGGAA
TSA: Bombus terrestris Contig19286.Bote mRNA sequence.
JI044756.1:358-377
TAAGTACGCTAATTTTTATGAGTCGACGCG358TGACTGGAAAATGGAACGAAAATGATTGAAAGAAAATTTGGCCCATAAAT
TSA: Bombus terrestris a259.btermhead mRNA sequence.
JL642131.1:403-422
TAAGTACGCTAATTTTTATGAGTCGACGCG403TGACTGGAAAATGGAACGAAAATGATTGAAAGAAAATTTGGCCCATAAAT
TSA: Bombus terrestris a5561.bterqhead mRNA sequence.
JL715711.1:1289-1308
TAAGTACGCTAATTTTTATGAGTCGACGCG1289TGACTGGAAAATGGAACGAAAATGATTGAAAGAAAATTTGGCCCATAAAT
Solanum tuberosum clone plbr3 putative oxysterol-binding protein mRNA, partial cds.
AY450639.1:635-654
ACAACAGTGAGGAAGAACCCANAATTTTGA635TGACTGGAAAATGGAACGAATC
Solanum tuberosum oxysterol-binding protein mRNA, complete cds.
AY450640.1:877-896
ACAACAGTGAGGAAGAACCCAAAATTTTGA877TGACTGGAAAATGGAACGAATCTATAAGTTATCAACCTTGTGATTTGGAA
Solanum tuberosum cultivar Solyntus chromosome 10.
CP055243.1:44942832-44942851
ACAACAGTGAGGAAGAACCCAAAATTTTGA44942832TGACTGGAAAATGGAACGAATCTATAAGTTATCAACCCTGTGATTTGGAA
Capsicum annuum oxysterol-binding protein (OBP) mRNA, complete cds.
FJ617521.1:1046-1065
ACAACAGTGAGGAAGAACCCAAAATTTTGA1046TGACTGGAAAATGGAACGAATCTATAAGTTATCAACCCTGTGATATGGAA
Solanum pennellii chromosome ch10, complete genome.
HG975449.1:81151150-81151169
ACAACAGTGAGGAAGAACCCAAAATTTTGA81151150TGACTGGAAAATGGAACGAATCTATAAGTTATCAACCCTGTGATTTGGAA
Sphenostylis stenocarpa genome assembly, chromosome: 1.
OY731398.1:7526573-7526592
ATAATTCTGCTGATGAGCCTAAGATACTGA7526573TGACTGGAAAATGGAACGAAGTTATGAGTTACCAAGTTTGTGACTTAGAG
Calendula officinalis genome assembly, chromosome: 16.
OY970835.1:32010155-32010174
ATAACTCTGCTGAAGAACCTAAAATATTAA32010155TGACTGGAAAATGGAACGAATCTATGAGTTACCAGCCTTGTGATTTAGAA
Erannis defoliaria genome assembly, chromosome: 10.
FR990076.1:6544067-6544086
ATTGTAACGTACAAAATACACCGAACATGC6544067TGACTGGAAAATGGAACGAACCGTTGCGTCTACAACTGAACGATCTGAAT
Xestia xanthographa genome assembly, chromosome: 16.
LR990657.1:19914240-19914259
TCACTGAAGACACGAAAAGGACTCCATAAC19914240TGACTGGAAAATGGAACGAAATGGAATGTTATAAATGGGACATTCAAACC
Noctua fimbriata genome assembly, chromosome: 13.
LR990933.1:12387043-12387062
TCACTGAAGACAAGAAATAGACTCCATAAC12387043TGACTGGAAAATGGAACGAAATGGAATGTTATAAATGGAACATTCAAACC
Noctua pronuba genome assembly, chromosome: 12.
LR999904.1:11730428-11730447
TCACTGAAGACACGAAATAGACTCCATAAC11730428TGACTGGAAAATGGAACGAAATGGAATGTTATAAATGGAACATTCAAACC
Eugnorisma glareosa genome assembly, chromosome: 15.
OX387972.1:14430842-14430861
ACGACGCGACACTCAAACAAACTCCATAAC14430842TGACTGGAAAATGGAACGAAATGGAATGTTATAAATGGAACATTCAAATT
Lycophotia porphyrea genome assembly, chromosome: 15.
OX465398.1:11963018-11963037
TCACTAAAGACACGAAATAGACTCCGTAAC11963018TGACTGGAAAATGGAACGAAATGGAATGTTAGAAATGGAACATTCAAACC
Noctua comes genome assembly, chromosome: 13.
OY720279.1:12134284-12134303
TCACTGAAGACACGAAATAGACTCCATAAC12134284TGACTGGAAAATGGAACGAAATGGAATGTTATAAATGGAACATTCAAACC
Sepiola atlantica genome assembly, chromosome: 41.
OY744555.1:15291828-15291847
AAATGTAGAATTAAATTTTTTTTTTTTTTT15291828TGACTGGAAAATGGAACGAAATCGAAGTAATTCTTTAATAAGGGTTTTAA
EST728537 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAA87 3' end, mRNA sequence.
CK244900.1:633-652
TTCCAAATCACAGGGTTGATAACTTATAGA633TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
KS25026M16 KS25 Capsicum annuum cDNA, mRNA sequence.
GD126215.1:689-708
TTCCATATCACAGGGTTGATAACTTATAGA689TTCGTTCCATTTTCCAGTCATCA
TSA: Bombus terrestris a259.btermhead mRNA sequence.
JL642131.1:2703-2722
ATTTATGGGCCAAATTTTCTTTCAATCATT2703TTCGTTCCATTTTCCAGTCACGCGTCGACTCATAAAAATTAGCGTACTTA
TSA: Bombus terrestris a5561.bterqhead mRNA sequence.
JL715711.1:3589-3608
ATTTATGGGCCAAATTTTCTTTCAATCATT3589TTCGTTCCATTTTCCAGTCACGCGTCGACTCATAAAAATTAGCGTACTTA
TSA: Bombus terrestris a14481.bterqova mRNA sequence.
JL804118.1:1148-1167
ATTTATGGGCCAAATTTTCTTTCAATCATT1148TTCGTTCCATTTTCCAGTCACGCGTCGACTCATAAAAATTAGCGTACTTA
TSA: Capsicum annuum MGMT_Contig40502 mRNA sequence.
JW090746.1:914-933
TTCCATATCACAGGGTTGATAACTTATAGA914TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
POTEN88TF Solanum tuberosum RHPOTKEY BAC ends Solanum tuberosum genomic clone RHPOTKEY042_P08, genomic survey sequence.
EI833737.1:91-110
TTCCAAATCACAGGGTTGATAACTTATAGA91TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTC
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:209894387-209894406
TTCCATATCACAGGGTTGATAACTTATAGA209894387TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
Solanum tuberosum cultivar P8 chromosome 10.
CP046683.1:54344915-54344934
TTCCAAATCACAGGGTTGATAACTTATAGA54344915TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
Solanum tuberosum cultivar MSH/14-112 chromosome 10.
CP046694.1:54345083-54345102
TTCCAAATCACAGGGTTGATAACTTATAGA54345083TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
Solanum pinnatisectum cultivar CGN17745 chromosome 10.
CP047557.1:54337611-54337630
TTCCAAATCACAGGGTTGATAACTTATAGA54337611TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:119476276-119476295
TTCCAAATCACAGGGTTGATAACTTATAGA119476276TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:214717195-214717214
TTCCATATCACAGGGTTGATAACTTATAGA214717195TTCGTTCCATTTTCCAGTCATCAAAATTTTGGGTTCTTCCTCACTGTTGT
Solanum verrucosum cultivar 11H23 chromosome 10.
CP133621.1:52068200-52068219
TTCCAAATCACAGGGTTGATAACTTATAGA52068200TTCGTTCCATTTTCCAGTCATCAAAATTTTAGGTTCTTCCTCACTGTTGT
Bombus terrestris genome assembly, chromosome: 14.
OU342934.1:4311733-4311752
ATTTATGGGCCAAATTTTCTTTCAATCATT4311733TTCGTTCCATTTTCCAGTCACGCGTCGACTCATAAAAATTAGCGTACTTA
Athalia rosae genome assembly, chromosome: 5.
OU795004.1:1582653-1582672
TTTTAGTTCCATATAATTAGACAATATTTA1582653TTCGTTCCATTTTCCAGTCATCCGATTCGTATGGAACTTGAGATCAAATC
Sepiola atlantica genome assembly, chromosome: 25.
OY744539.1:67878888-67878907
TTTCTTTTTTATCTTTTCTTTTCTTTCTTA67878888TTCGTTCCATTTTCCAGTCAATTTTCTTCCTTTTCTTTTCAGTTTCTGTC
Sepiola atlantica genome assembly, chromosome: 25.
OY744539.1:67879473-67879492
TTTCTTTTTTATATTTTCTTTTCTTTCTTA67879473TTCGTTCCATTTTCCAGTCAATTTTCTTCCTTTCCTTTTCAGTTTCTGTC
Xestia rhomboidea genome assembly, chromosome: 13.
OY970769.1:7067095-7067114
GGTTTGAATGTTCCATTTATAACATTCCAT7067095TTCGTTCCATTTTCCAGTCAGTTATGGAGTCCTTTTCGTGTCTTCAGTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGACTGGAAAATGGAACGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGACTGGAAAATGGAACGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.525 | 0.516 | search_plus_done; http://172.18.8.135:50400/match?q=TGACTGGAAAATGGAACGAA&k=0&no_gap=0&offset=0&limit=50
0.868 | 0.344 | search_minus_done; http://172.18.8.135:50400/match?q=TTCGTTCCATTTTCCAGTCA&k=0&no_gap=0&offset=0&limit=28
0.881 | 0.012 | cgi_end;

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