GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-14 16:53:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

ss67b12.y1 Gm-c1062 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1062-1464 5' similar to TR:Q9SD10 Q9SD10 HYPOTHETICAL 38.2 KD PROTEIN, mRNA sequence.
BE806616.1:11-30
GCTTGGCCCT11TGAGAACGCGCTAACTGCTAAGTTACGCGAGGGATGCGCAGTGCGCACCC
Glycine max cDNA clone: GMFL01-05-H07, 5'end.
BW653142.1:21-40
GGCAATCTTTGCTTGGCCCT21TGAGAACGCGCTAACTGCTAAGTTACGCGAGGGATGCGCAGTGCGCACCC
Glycine max cDNA clone: GMFL01-43-K20, 5'end.
BW678535.1:37-56
ATTTGCAAATTGCAATCTTTGCTTGGCCCT37TGAGAACGCGCTAACTGCTAAGTTACGCGAGGGATGCGCAGTGCGCACCC
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:6211167-6211186
ATTTGCAAATTGCAATCTTTGCTTGGCCCT6211167TGAGAACGCGCTAACTGCTAAGTTACGCGAGGGATGCGCAGTGCGCACCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAGAACGCGCTAACTGCTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGAACGCGCTAACTGCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.163 | 0.154 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGAACGCGCTAACTGCTA&k=0&no_gap=0&offset=0&limit=50
0.180 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TAGCAGTTAGCGCGTTCTCA&k=0&no_gap=0&offset=0&limit=46
0.180 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).