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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:49:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Syritta pipiens genome assembly, chromosome: 1.
LR994571.1:52108080-52108101
GGCCACATTATCCGTAGATTTCCCTGCTGA52108080TGAGATTCATCTTGTGGAGGTGGTTCATGTCCTATAAGTGCTTCGCGTAATA
RCRA673TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRA673, mRNA sequence.
EG666972.1:59-80
ATTCCCACTTCGAAAACCACCCTCCTCCTC59CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRCF57TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCF57, mRNA sequence.
EG669952.1:184-205
ATTCCCACTTCGAAAACCACCCTCCTCCTC184CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRCI49TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCI49, mRNA sequence.
EG670470.1:139-160
ATTCCCACTTCGAAAACCACCCTCCTCCTC139CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRCN15TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCN15, mRNA sequence.
EG671264.1:130-151
ATTCCCACTTCGAAAACCACCCTCCTCCTC130CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRCW38TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCW38, mRNA sequence.
EG672870.1:132-153
ATTCCCACTTCGAAAACCACCCTCCTCCTC132CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRCX57TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRCX57, mRNA sequence.
EG673058.1:139-160
ATTCCCACTTCGAAAACCACCCTCCTCCTC139CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRDO07TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDO07, mRNA sequence.
EG677701.1:131-152
ATTCCCACTTCGAAAACCACCCTCCTCCTC131CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRDT38TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDT38, mRNA sequence.
EG678602.1:91-112
ATTCCCACTTCGAAAACCACCCTCCTCCTC91CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRE353TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRE353, mRNA sequence.
EG680478.1:115-136
ATTCCCACTTCGAAAACCACCCTCCTCCTC115CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRE749TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRE749, mRNA sequence.
EG681228.1:144-165
ATTCCCACTTCGAAAACCACCCTCCTCCTC144CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRAF95TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRAF95, mRNA sequence.
EG682132.1:108-129
ATTCCCACTTCGAAAACCACCCTCCTCCTC108CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCRAK70TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRAK70, mRNA sequence.
EG682908.1:232-253
ATTCCCACTTCGAAAACCACCCTCCTCCTC232CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCSAG14TP Castor bean cDNA library from seeds (12-33 days after pollination), 1.4 kb Ricinus communis cDNA clone RCSAG14, mRNA sequence.
EG691223.1:133-154
ATTCCCACTTCGAAAACCACCCTCCTCCTC133CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
RCSB017TP Castor bean cDNA library from seeds (12-33 days after pollination), 1.4 kb Ricinus communis cDNA clone RCSB017, mRNA sequence.
EG693129.1:138-159
ATTCCCACTTCGAAAACCACCCTCCTCCTC138CACCTCCACAAGATGAATCTCAAATCCTCGATTCCCAAAACCTAGACAGAAC
Endomychus coccineus genome assembly, chromosome: 3.
OY294069.1:127221584-127221605
ATGCTAACAGGGTACAGATCGTTTAATTAC127221584CACCTCCACAAGATGAATCTCAGCGATTCAGCTTTGTGCAGGTGGTGCAAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGAGATTCATCTTGTGGAGGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGATTCATCTTGTGGAGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.174 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGATTCATCTTGTGGAGGTG&k=0&no_gap=0&offset=0&limit=50
1.142 | 0.968 | search_minus_done; http://172.18.8.135:50400/match?q=CACCTCCACAAGATGAATCTCA&k=0&no_gap=0&offset=0&limit=49
1.152 | 0.010 | cgi_end;

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