GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 17:19:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH003_00379m, 5' end sequence.
AB450691.1:32-52
TCATTTTATTTTATTTTTCTTTTATTTCAG32CAAATTTCTCTGCCAGGCTCACGCGGGTGTTGATTCTCTCTCTCTCTCTCT
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:336246-336266
TCATTTTATTTTATTTTTCTTTTATTTCAG336246CAAATTTCTCTGCCAGGCTCACGCGGGTGTTGATTCTCTCTCTCTCTCTCT
Ceriagrion tenellum genome assembly, chromosome: 1.
OY720632.1:167359406-167359426
CATTAAAGAGAAACAAGGTTAAGTTTCCTT167359406CAAATTTCTCTGCCAGGCTCATGTGCTTCACTGCCTTCAGAACCTTCTTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAGCCTGGCAGAGAAATTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGCCTGGCAGAGAAATTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.092 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGCCTGGCAGAGAAATTTG&k=0&no_gap=0&offset=0&limit=50
0.107 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=CAAATTTCTCTGCCAGGCTCA&k=0&no_gap=0&offset=0&limit=50
0.110 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).