GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-01 05:14:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

NF055F05IN1F1045 Insect herbivory Medicago truncatula cDNA clone NF055F05IN 5', mRNA sequence.
BG449665.1:280-300
TAAGGACAAAGTAATTTCAGCCATCAAGTA280TGAGCTGGATCGTAGTGGCCAAGTTTTTTATGTTCTGCCACGTATTAAAGG
s13dNF28B10AT089_509934 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence.
CX526095.1:434-454
TAAGGACAAAGTAATTTCAGCCATCAAGTA434TGAGCTGGATCGTAGTGGCCAAGTTTTTTATGTTCTGCCACGTATTAAAGG
Medicago truncatula chromosome 7 clone mte1-17h9, complete sequence.
AC157890.2:2059-2079
TAAGGACAAAGTAATTTCAGCCATCAAGTA2059TGAGCTGGATCGTAGTGGCCAAGTTTTTTATGTTCTGCCACGTATTAAAGG
Draba incana genome assembly, chromosome: 12.
OY755213.1:36738704-36738724
TAAGGAAAAGGTGATAGAAGCAATTAAAAA36738704TGAGCTGGATCGTAGTGGCCAAGTTTTCTATGTCTTGCCTCGGATTAAAGG
Draba incana genome assembly, chromosome: 6.
OY755207.1:10071-10091
CCTTTAATCCGAGGCAAGACATAGAAAACT10071TGGCCACTACGATCCAGCTCATTTTTAATTGCTTCTATCACCTTTTCCTTA
Barbarea vulgaris genome assembly, chromosome: 7.
OY763893.1:16039-16059
CCTTTAATCCGAGGCAAAACATAGAACACT16039TGGCCACTACGATCCAGCTCATTTTGTATTGCTTCTATCACCTTTTCCTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAGCTGGATCGTAGTGGCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGCTGGATCGTAGTGGCCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.161 | 0.153 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGCTGGATCGTAGTGGCCA&k=0&no_gap=0&offset=0&limit=50
0.180 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCCACTACGATCCAGCTCA&k=0&no_gap=0&offset=0&limit=46
0.181 | 0.001 | cgi_end;

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