GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:15:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH014M07, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189600.2:84614-84634
GCGTGAGAGTGACGATAATATCACACCTAA84614TGAGTATCTCTCTTGGCAAACAAATAAAATCTTTAACGTACGCTTGACATG
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 82 unordered pieces.
FJ789651.1:272530-272550
GCGTGAGAGTGACGATAATATCACACCTAA272530TGAGTATCTCTCTTGGCAAACAAATAAAATCTTTAACGTACGCTTGACATG
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:59003652-59003672
TTTTACGATTCTTCTGAATTTGGAATCTAA59003652TGAGTATCTCTCTTGGCAAACAATAAAATCTTTAACGTACGCTTGACATGT
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:356684995-356685015
ATTTTAACAGGGGCTGGGATATCTAAAGTG356684995GTTTGCCAAGAGAGATACTCAGCAGCTACTGCCCTGTAAAATCATACTACA
lkg99c01.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ074740.1:497-517
ACATGTCAAGCGTACGTTAAAGATTTTATT497GTTTGCCAAGAGAGATACTCATTAGATTCCAAATTCAGAAGAATCGTAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAGTATCTCTCTTGGCAAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGTATCTCTCTTGGCAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGTATCTCTCTTGGCAAAC&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTGCCAAGAGAGATACTCA&k=0&no_gap=0&offset=0&limit=47
0.118 | 0.001 | cgi_end;

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