GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:29:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC18a20_017, unspecified EST.
FY460259.1:175-198
TAGTCTCCTCGCCGGAGATGAAGATGATAC175TGAGTTTCTGATGGATTCTGAGAGCAACAGGCGCATTTTAGCCGCAAGAAGGTA
Trifolium repens mRNA, clone: WCC22n04_056, unspecified EST.
FY461948.1:175-198
TAGTCTCCTCGCCGGAGATGAAGATGATAC175TGAGTTTCTGATGGATTCTGAGAGCAACAGGCGCATTTTAGCCGCAAGAAGGTA
Trifolium repens mRNA, clone: WCC31e01, unspecified EST.
FY464946.1:191-214
TAGCCTTCTCGCCGGAGATGAAGATGATAC191TGAGTTTCTGATGGATTCTGAGAGTAACAGGCGCATTTTAGCTGCAAGAAGGTA
Trifolium repens mRNA, clone: WCC37j19, unspecified EST.
FY467233.1:176-199
TAGCCTTCTCGCCGGAGATGAAGATGATAC176TGAGTTTCTGATGGATTCTGAGAGTAACAGGCGCATTTTAGCTGCAAGAAGGTA
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:58604576-58604599
TAGCCTTCTCGCCGGAGATGAAGATGATAC58604576TGAGTTTCTGATGGATTCTGAGAGTAACAGGCGCATTTTAGCTGCAAGAAGGTA
Trifolium repens isolate ACLI19 chromosome 08_Pall.
CP125851.1:51123743-51123766
TAGTCTCCTCGCCGGAGATGAAGATGATAC51123743TGAGTTTCTGATGGATTCTGAGAGCAACAGGCGCATTTTAGCCGCAAGAAGGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGAGTTTCTGATGGATTCTGAGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGAGTTTCTGATGGATTCTGAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.384 | 0.375 | search_plus_done; http://172.18.8.135:50400/match?q=TGAGTTTCTGATGGATTCTGAGAG&k=0&no_gap=0&offset=0&limit=50
0.415 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCAGAATCCATCAGAAACTCA&k=0&no_gap=0&offset=0&limit=44
0.415 | 0.000 | cgi_end;

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