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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-11 21:20:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Fish metagenome RNA, contig: contig9317_C2339398, isolate: DFGC7.
LA230869.1:103-122
GCAGTTTAAACTTGGCTAGGCCGGATGCTA103CAAGGCCCTACACAAGATCAAGCACAGGCTCAACACTCACCAATGCCTCT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:147433279-147433298
AAAAGTGTCACAAAAGCGCAAAAACGGAAC147433279CAAGGCCCTACACAAGATCACTTGGATTATACTAACTAGACAGTGTTTCA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:153155189-153155208
AAAAGTGTCACAAAAGCGCAAAAACGGAAC153155189CAAGGCCCTACACAAGATCACTTGGATTATACTAACTAGACAGTGTTTCA
Chenopodium album genome assembly, chromosome: 9.
OX419216.1:67174827-67174846
CGTCGTAAAGTGCAAGTGCAAAGACCGAAC67174827CAAGGCCCTACACAAGATCAACAATGAATCTTACAAGATTTCATAATCTG
Chenopodium album genome assembly, chromosome: 27.
OX419234.1:31693179-31693198
TGTCGTAAAGTGCAAGTGCAAAGACCGAAC31693179CAAGGCCCTACACAAGATCAACAATGAATCTTACAAGATTTCATAGTCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGATCTTGTGTAGGGCCTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATCTTGTGTAGGGCCTTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.318 | 0.310 | search_plus_done; http://172.18.8.135:50400/match?q=TGATCTTGTGTAGGGCCTTG&k=0&no_gap=0&offset=0&limit=50
0.456 | 0.137 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGGCCCTACACAAGATCA&k=0&no_gap=0&offset=0&limit=50
0.459 | 0.003 | cgi_end;

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