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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 18:26:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Takifugu rubripes genome assembly, chromosome: 21.
LR584233.2:7696815-7696834
TTCCCAGTCACTTAAAATGATGCTAAACAC7696815TGATGGAGGCTTTCATGTCATTACATTTGAAAATGCATTAAGGTCGGTCA
Pseudomonas sp. 02C 26 chromosome.
CP025262.1:360000-360019
GTACCAGTGGTGTTCCGGTGTTGTCGAACG360000TGATGGAGGCTTTCATGTCAGGTACTCCTTGTTAGTGGAAGCGCTAGATT
Corynebacterium urealyticum strain FDAARGOS_994 chromosome, complete genome.
CP066064.1:1049619-1049638
CATAGAAGCGAATGTGATCGTCGAAATCTC1049619TGATGGAGGCTTTCATGTCACGAAGGTCCGGGTCAAGGGAATTTCCATCC
Corynebacterium urealyticum strain FDAARGOS_995 chromosome.
CP066289.1:779472-779491
CATAGAAGCGAATGTGATCGTCGAAATCTC779472TGATGGAGGCTTTCATGTCACGAAGGTCCGGGTCAAGGGAATTTCCATCC
Humulus lupulus genome assembly, chromosome: 5.
OY720652.1:150080411-150080430
TCTTTGTTATTTTGCAGATGAAAACACGAG150080411TGACATGAAAGCCTCCATCACTAGCTCTTGTTCGACCAAAAAGAGGCAGA
Corynebacterium urealyticum DSM 7109 complete genome.
AM942444.1:1915904-1915923
GGATGGAAATTCCCTTGACCCGGACCTTCG1915904TGACATGAAAGCCTCCATCAGAGATTTCGACGATCACATTCGCTTCTATG
Corynebacterium urealyticum DSM 7111, complete genome.
CP004085.1:1880406-1880425
GGATGGAAATTCCCTTGACCCGGACCTTCG1880406TGACATGAAAGCCTCCATCAGAGATTTCGACGATCACATTCGCTTCTATG
Corynebacterium urealyticum strain FDAARGOS_996 chromosome, complete genome.
CP065982.1:1557282-1557301
GGATGGAAATTCCCTTGACCCGGACCTTCG1557282TGACATGAAAGCCTCCATCAGAGATTTCGACGATCACATTCGCTTCTATG
Corynebacterium urealyticum strain NCTC12011 genome assembly, chromosome: 1.
LT906481.1:1233553-1233572
GGATGGAAATTCCCTTGACCCGGACCTTCG1233553TGACATGAAAGCCTCCATCAGAGATTTCGACGATCACATTCGCTTCTATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGATGGAGGCTTTCATGTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATGGAGGCTTTCATGTCA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.330 | 0.321 | search_plus_done; http://172.18.8.135:50400/match?q=TGATGGAGGCTTTCATGTCA&k=0&no_gap=0&offset=0&limit=50
0.420 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=TGACATGAAAGCCTCCATCA&k=0&no_gap=0&offset=0&limit=46
0.424 | 0.003 | cgi_end;

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