GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 20:39:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: AHGS48F08.
DH961608.1:587-605
GAGAGAGAGAGAGAGTCGTCGATACGACGT587TGATGTGAGGAGGCGATGTCGTCGTTTCCAGTGCCGGCAATGGCAAGAG
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:94705679-94705697
GAGAGAGAGAGAGAGTCGTCGATACGACGT94705679TGATGTGAGGAGGCGATGTCGTCGTTTCCAGTGCCGGCAATGGCAAGAG
4_Tte_b3v08.
OE006396.1:3344-3362
CACGTGCTGAGCTGGCTTGATTTAGATGTG3344TGATGTGAGGAGGCGATGTTTACATCATTATCGCTGCGCTTTCATAGGT
5_Tge_b3v08.
OE840282.1:64106-64124
CACGTGCTGAGCTGGCTTGATTTAGATGTG64106TGATGTGAGGAGGCGATGTTTACATCATTATCGCTGCGCTTTCATAGGT
4_Tbi_b3v08.
OD699866.1:294-312
ACCTATGAAAGCGCAGCGATAATGATGTAA294ACATCGCCTCCTCACATCACACATCTAAATCAAGCCAGCTCAGCACGTG
Heterobilharzia americana genome assembly, chromosome: Z.
OX104110.1:99867197-99867215
TACAACCCATACTCCGATCACTTCATAACC99867197ACATCGCCTCCTCACATCATATATCCATCCAGTGAATTACCCTCACCAC
Heterobilharzia americana genome assembly, chromosome: Z.
OX104110.1:99872246-99872264
TACAACCCATACTCCGATCACTTCATAACC99872246ACATCGCCTCCTCACATCATATATCCATCCAGTGAATTACCCTCACCAC
Heterobilharzia americana genome assembly, chromosome: Z.
OX104110.1:99877294-99877312
TACAACCCATACTCCGATCACTTCATAACC99877294ACATCGCCTCCTCACATCATATATCCATCCAGTGAATTACCCTCACCAC
Heterobilharzia americana genome assembly, chromosome: Z.
OX104134.1:77653975-77653993
TACAACCCATACTCCGATCACTTCATAACC77653975ACATCGCCTCCTCACATCATATATCCATCCAGTGAATTACCCTCACCAC
Heterobilharzia americana genome assembly, chromosome: Z.
OX104134.1:77659020-77659038
TACAACCCATACTCCGATCACTTCATAACC77659020ACATCGCCTCCTCACATCATATATCCATCCAGTGAATTACCCTCACCAC
Heterobilharzia americana genome assembly, chromosome: Z.
OX104134.1:77664067-77664085
TACAACCCATACTCCGATCACTTCATAACC77664067ACATCGCCTCCTCACATCATATATCCATCCAGTGAATTACCCTCACCAC
Heterobilharzia americana genome assembly, chromosome: Z.
OX104134.1:77669113-77669131
TACAACCCATACTCCGATCACTTCATAACC77669113ACATCGCCTCCTCACATCATATATCCATCCAGTGAATTACCCTCACCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGATGTGAGGAGGCGATGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATGTGAGGAGGCGATGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.143 | 0.134 | search_plus_done; http://172.18.8.135:50400/match?q=TGATGTGAGGAGGCGATGT&k=0&no_gap=0&offset=0&limit=50
0.172 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=ACATCGCCTCCTCACATCA&k=0&no_gap=0&offset=0&limit=46
0.177 | 0.005 | cgi_end;

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