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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 09:03:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: 8iHA00A32, cultivar: YI-0311.
DE998453.1:297-316
ATTTATTGAAATTTTTTCTCCTAAAACAAA297TGATTCGACATCGTTTTTGGATTATTTAAGCACCAAAACTATAACAACGT
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:4743565-4743584
ACGTTGTTATAGTTTTGGTGCTTAAATAAT4743565CCAAAAACGATGTCGAATCATTTGTTTTAGGAGAAAAAATTTCAATAAAT
Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:4693361-4693380
ACGTTGTTATAGTTTTGGTGCTTAAATAAT4693361CCAAAAACGATGTCGAATCATTTGTTTTAGGAGAAAAAATTTCAATAAAT
Phaedon cochleariae genome assembly, chromosome: 2.
OU896708.1:6958224-6958243
ATTTGCGATTTGAACAAAATCAGGAAAATG6958224CCAAAAACGATGTCGAATCATAATCAACGGATCAAATCAAGATCACGATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGATTCGACATCGTTTTTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATTCGACATCGTTTTTGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.185 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=TGATTCGACATCGTTTTTGG&k=0&no_gap=0&offset=0&limit=50
0.291 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAAAACGATGTCGAATCA&k=0&no_gap=0&offset=0&limit=49
0.293 | 0.002 | cgi_end;

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