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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 16:06:04, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Camellia sinensis genome assembly, chromosome: 2.
OZ007445.1:232026076-232026095
TATATAATAGAAAAACAAAAAACACATCTT232026076TGATTTCACAACTATACCAATAACACAAAATTCACACAATCTTAAGATCA
Camellia sinensis genome assembly, chromosome: 2.
OZ007460.1:224075266-224075285
TATTTAATAGAAAAACAAAAAACACATCTT224075266TGATTTCACAACTATACCAATAACACAAAATTCACACAATCTTAAGATCA
Limosilactobacillus frumenti strain LF145 chromosome, complete genome.
CP044534.1:479108-479127
TATGCCCCTCATTTAAAAGCGCAAAATAAG479108TGATTTCACAACTATACCAATATTTTATATAGCGCTTTCTGTTCTTGAAT
Amphipyra tragopoginis genome assembly, chromosome: 22.
HG992013.1:18405823-18405842
TCTGTAAACTCGATACACCTTACAACGTAA18405823TGATTTCACAACTATACCAATATAAAGATAGTGGAATCGCTTAATAAGGA
Epistrophe grossulariae genome assembly, chromosome: 2.
OV839567.1:67484470-67484489
AAAATCTAGATTACATGTAGTATGAACTAT67484470TGATTTCACAACTATACCAATAGTTTACTTGTAAATCAAAATAATAAATT
Naticarius hebraeus genome assembly, chromosome: 4.
OZ204915.1:34630960-34630979
AAAGAATAACTATAACGTTCTGCGTGTGCT34630960TGATTTCACAACTATACCAACCCTGTTGGATTTGCCACCGGCTGCGGTTG
Naticarius hebraeus genome assembly, chromosome: 4.
OZ204915.1:114646150-114646169
AAAGAATAACTATAACGTTCTGCGTGTGCT114646150TGATTTCACAACTATACCAACCCTGTTGGATTTGCCACCGGCTGCGGTTG
Naticarius hebraeus genome assembly, chromosome: 9.
OZ204920.1:83817519-83817538
AAAGAATAACTATAACGTTCTGCGTGTGCT83817519TGATTTCACAACTATACCAACCCTGTTGGATTTGCCACCGGCTGCGGTTG
Naticarius hebraeus genome assembly, chromosome: 11.
OZ204922.1:51241526-51241545
AAAGAATAACTATAACGTTCTGCGTGTGCT51241526TGATTTCACAACTATACCAACCCTGTTGGATTTGCCACCGGCTGCGGTTG
Naticarius hebraeus genome assembly, chromosome: 11.
OZ204922.1:52032741-52032760
AAAGAATAACTATAACGTTCTGCGTGTGCT52032741TGATTTCACAACTATACCAACCCTGTTGGATTTGCCACCGGCTGCGGTTG
Naticarius hebraeus genome assembly, chromosome: 11.
OZ204922.1:97659471-97659490
AAAGAATAACTATAACGTTCTGCGTGTGCT97659471TGATTTCACAACTATACCAACCCTGTTGGATTTGCCACCGGCTGCGGTTG
ESTRTADTMSD1_275 ESTRTADTMSD1 Camellia sinensis var. assamica cDNA clone 234 5', mRNA sequence.
GH623847.1:157-176
TGATCTTAAGATTGTGTGAATTTTGTGTTA157TTGGTATAGTTGTGAAATCAAAGATGTGTTTTTTGTTTTTCTACTAAAAA
Sambucus nigra genome assembly, chromosome: 5.
OX422211.1:702809066-702809085
GTGTTTGTTGATGCTTTTTTTTTTCTTCTT702809066TTGGTATAGTTGTGAAATCAAGCCTAATCGACCCATGTTTAAGCACATTC
Aphrophora alni genome assembly, chromosome: 2.
OY740767.1:143895362-143895381
GTACTCTGGATCGTACAAGAAAATGTGATA143895362TTGGTATAGTTGTGAAATCAGACAGTGTTGTTTAAAATAAAGGATTGTTG
Plagodis pulveraria genome assembly, chromosome: 17.
OY982966.1:10220392-10220411
TAAGAAAGGGAAATGTCAGCTGAAACTAAG10220392TTGGTATAGTTGTGAAATCAATTCGTGAAACCATTCTGCAACTACCTATG
Naticarius hebraeus genome assembly, chromosome: 13.
OZ204924.1:15603553-15603572
CAACCGCAGCCGGTGGCAAATCCAACAGGG15603553TTGGTATAGTTGTGAAATCAAGCACACGCAGAACGTTATAGTTATTCTTT
Bolma rugosa genome assembly, chromosome: 15.
OZ209850.1:102220051-102220070
AGTTATATAAAAATGGCCTCATAGAGAAAA102220051TTGGTATAGTTGTGAAATCAGTCCGACATGCCCACCTACTTCCAATATCA
Lissotriton vulgaris genome assembly, chromosome: 3_1.
OZ183353.1:897904208-897904227
TAAAGTAAAAAAGGTGAACAAAATTAACAT897904208TTGGTATAGTTGTGAAATCATTACTATAAAAATTAATGAAGCAAATAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGATTTCACAACTATACCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGATTTCACAACTATACCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.298 | 0.289 | search_plus_done; http://172.18.8.135:50800/match?q=TGATTTCACAACTATACCAA&k=0&no_gap=0&offset=0&limit=50
0.481 | 0.183 | search_minus_done; http://172.18.8.135:50800/match?q=TTGGTATAGTTGTGAAATCA&k=0&no_gap=0&offset=0&limit=39
0.486 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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