GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 06:48:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Barbus barbus genome assembly, chromosome: 30.
OW387197.1:12248479-12248498
AAAACCACTGGGATCTAAATTTGGAGGAAG12248479TGCAACCACAGATTTTAGGGATAGACGGAGTAACAGGGTTGACGGCTGTG
Lasioglossum pauxillum genome assembly, chromosome: 7.
OW121705.1:33203215-33203234
TAAATTTATGTAAAATGCGGCGTTTTTCCT33203215TGCAACCACAGATTTTAGGGCTTGAAGAATCTATCTCTTCAAGCTGTTTC
Lotus japonicus genomic DNA, chromosome 5, clone: LjT23J23, TM0428.
AP009974.1:30765-30784
ACACATATATATATTACATTAACCTTAAAA30765CCCTAAAATCTGTGGTTGCATCAATCCCATAATTTTAATGTGTCCTATAT
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:11266765-11266784
ACACACATATATATTACATTAACCTTAAAA11266765CCCTAAAATCTGTGGTTGCATCAATCCCATAATTTTAATGTGTCCTATAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCAACCACAGATTTTAGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCAACCACAGATTTTAGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=TGCAACCACAGATTTTAGGG&k=0&no_gap=0&offset=0&limit=50
0.117 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTAAAATCTGTGGTTGCA&k=0&no_gap=0&offset=0&limit=48
0.118 | 0.002 | cgi_end;

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