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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 15:20:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Bufo bufo genome assembly, chromosome: 2.
LR991668.1:78687042-78687061
GCGTGAGCACCAGCACTGCAGAGGTACGGG78687042TGCAGAACAGATTTTCCCTGCCAAAAAAAGGAAGAAAAAAAAACTGCCAC
Trifolium repens mRNA, clone: WCC43h19_012, unspecified EST.
FY469347.1:88-107
GTTGATCGCTCTTTCTTTCAGCTATGTCAT88TGCAGAACAGATTTTCCCTGTTCATATCGGTAGTATATTTGGTGGTGGTG
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:41144474-41144493
GTTGATCGCTCTTTCTTTCAGCTATGTCAT41144474TGCAGAACAGATTTTCCCTGTTCATATCGGTAATTTTTCCCTCTTTTGAA
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:38158609-38158628
GTTGATCGCTCTTTCTTTCAGCTATGTCAT38158609TGCAGAACAGATTTTCCCTGTTCATATCGGTACAAAATCCCTTACTTTAA
Trifolium fragiferum genome assembly, chromosome: 7.
OX940795.1:7141224-7141243
GTTGATCGCTTTATCTTTCAGCTATGTCTT7141224TGCAGAACAGATTTTCCCTGTTCATATCGGTAATTTTCCCCTCTTTTTAA
Chrysotoxum bicinctum genome assembly, chromosome: 3.
OU426989.1:107507210-107507229
AGAATTTGTATTTAGTAGACTCAGTATATG107507210TGCAGAACAGATTTTCCCTGATAAGAGTTGAAAGAGAAAAACACATTATT
Sicus ferrugineus genome assembly, chromosome: X.
OV277351.1:16830806-16830825
GCTACTTGTCCGCAGCTTAATTTGTCTGTT16830806TGCAGAACAGATTTTCCCTGGGTAAAAAAACGGACACCAAAAAACTACCA
Peromyscus eremicus genome assembly, chromosome: 1.
OX460394.1:70767933-70767952
CCAAGCTTCCAGCAACATGTTGGTTTCCAG70767933CAGGGAAAATCTGTTCTGCAGCATGATAGGCGGTTGCCTGGTAGCCACAG
Chrysotoxum bicinctum genome assembly, chromosome: 2.
OU426988.1:211973450-211973469
ATAATGTGCGTTTTCTCTTTTAACTCTTAT211973450CAGGGAAAATCTGTTCTGCAAATTTACTGGATCTACTGAATATAAATTCT
Chrysotoxum bicinctum genome assembly, chromosome: 4.
OU426990.1:10611882-10611901
ATAATCTGCTTTTTCTCTTTCAACTCTTAT10611882CAGGGAAAATCTGTTCTGCACACAAATACTGATTCTACAGAATATAAATT
Meconema thalassinum genome assembly, chromosome: 2.
OX336390.1:129303327-129303346
TAATACCTTGTTGAATGCCATCAAGTGCCT129303327CAGGGAAAATCTGTTCTGCATAGTTATTAAAAAGAAGTGGTGAAAGAATG
Meconema thalassinum genome assembly, chromosome: 8.
OX336396.1:240966750-240966769
TAATACCTTGTTGAATGCCATCAAGTGCCT240966750CAGGGAAAATCTGTTCTGCATAGATATTATAAAGAAGCGGTGAAAGAATG
Meconema thalassinum genome assembly, chromosome: 9.
OX336397.1:113763609-113763628
TAATACCTTGTTGAATGCCATCAAGTGCCT113763609CAGGGAAAATCTGTTCTGCATAGATATTAAAAAGAAGTGGTAAAACCTTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCAGAACAGATTTTCCCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCAGAACAGATTTTCCCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.315 | 0.306 | search_plus_done; http://172.18.8.135:50400/match?q=TGCAGAACAGATTTTCCCTG&k=0&no_gap=0&offset=0&limit=50
0.470 | 0.155 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGGAAAATCTGTTCTGCA&k=0&no_gap=0&offset=0&limit=43
0.474 | 0.004 | cgi_end;

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