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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:00:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus genome assembly, chromosome: 14.
OW971556.1:104707200-104707219
ATTCTAAATTACATTTTTTTTCCGAAACAA104707200TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971586.1:105489114-105489133
ATTCTAAATTACATTTTTTTTCCGAAACAA105489114TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971607.1:104870514-104870533
ATTCTAAATTACATTTTTTTTCCGAAACAA104870514TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus domesticus genome assembly, chromosome: 14.
OW971619.1:104494285-104494304
GATTCTAAATTACATTTTTTTCCGAAACAA104494285TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971650.1:104584728-104584747
ATTCTAAATTACATTTTTTTTCCGAAACAA104584728TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus molossinus genome assembly, chromosome: 14.
OW971666.1:121705131-121705150
TGATTCTAAATTACATTTTTTCCAAAACAA121705131TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus spretus genome assembly, chromosome: 14.
OW971690.1:108768305-108768324
GATTCTAAGTTACATTTTTTTCCAAAACAA108768305TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971704.1:104184762-104184781
ATTCTAAATTACATTTTTTTTCCGAAACAA104184762TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971733.1:105344716-105344735
ATTCTAAATTACATTTTTTTTCCGAAACAA105344716TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971755.1:105092369-105092388
ATTCTAAATTACATTTTTTTTCCGAAACAA105092369TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus musculus genome assembly, chromosome: 14.
OW971776.1:104558719-104558738
GATTCTAAATTACATTTTTTTCCAAAACAA104558719TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971796.1:105279503-105279522
ATTCTAAATTACATTTTTTTTCCGAAACAA105279503TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971815.1:110645466-110645485
ATTCTAAATTACATTTTTTTTCCGAAACAA110645466TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus castaneus genome assembly, chromosome: 14.
OW971830.1:106195745-106195764
GATTCTAAATTACATTTTTTTCCGAAACAA106195745TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OW971849.1:106520504-106520523
ATTCTAAATTACATTTTTTTTCCGAAACAA106520504TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OX389808.1:112635456-112635475
GATTCTAAATTACATTTTTTTCCGAAACAA112635456TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OX390153.1:122639239-122639258
ATTCTAAATTACATTTTTTTTCCGAAACAA122639239TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Mus musculus genome assembly, chromosome: 14.
OX439028.1:111279075-111279094
ATTCTAAATTACATTTTTTTTCCGAAACAA111279075TGCAGAACCATCTTTTGCTCAACAGATGGAGTTTGGAGTCATGGCTAGCA
Phalacrocorax carbo genome assembly, chromosome: 1.
OY997601.1:204565652-204565671
ATATGGATGAGAAACCTCTCCAGTGTAATA204565652TGCAGAACCATCTTTTGCTCTCATTCCTAGGAATACCTTTATCTTTGCTC
Mus musculus BAC clone RP23-246A2 from chromosome 14, complete sequence.
AC158399.2:138035-138054
TGCTAGCCATGACTCCAAACTCCATCTGTT138035GAGCAAAAGATGGTTCTGCATTGTTTCGGAAAAAAAATGTAATTTAGAAT
Lagenorhynchus albirostris genome assembly, chromosome: 15.
OX459087.1:60990225-60990244
ATGTGCCTACAAGCACGTAACACTCCTAAA60990225GAGCAAAAGATGGTTCTGCATCAGTTAGGAATTGCATTCAGCAGCTAGCG
Phalacrocorax aristotelis genome assembly, chromosome: 1.
OX451222.1:14086400-14086419
GAGCAAAGATAAAGGTATTCCTAGGAATGA14086400GAGCAAAAGATGGTTCTGCATATTACACTGGAGAGGTTTCTCATCCATAT
Tortrix viridana genome assembly, chromosome: 18.
OY725190.1:8264720-8264739
GATAAACGACTTTTACGCGGATGGAGTCGT8264720GAGCAAAAGATGGTTCTGCATAAATCTATTGGAGTAGGTCTAGTGCAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCAGAACCATCTTTTGCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCAGAACCATCTTTTGCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.337 | 0.328 | search_plus_done; http://172.18.8.135:50400/match?q=TGCAGAACCATCTTTTGCTC&k=0&no_gap=0&offset=0&limit=50
0.441 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=GAGCAAAAGATGGTTCTGCA&k=0&no_gap=0&offset=0&limit=31
0.444 | 0.003 | cgi_end;

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