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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-18 03:01:24, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 12808 from patent US 9029523.
HK797624.1:548-567
AACTGTGGAGTGTTTAAGAGGAAGATTACT548TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAAGCAGAGCTTATTA
Brassica oleracea var. viridis mRNA, clone: KALE-030I13, 5' end sequence.
DK467216.1:479-498
AACTGTGGAGTGTCTAAGAGGGAGACTACT479TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Brassica oleracea var. viridis mRNA, clone: KALE-030I13, 3' end sequence.
DK526838.1:38-57
AACTGTGGAGTGTCTAAGAGGGAGACTACT38TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
EST7449 11-19 DAP Brassica Napus seed cDNA library Brassica napus cDNA clone B397F041, mRNA sequence.
EL629941.1:126-145
AACTGTGGAGTGTCTAAGAGGGAGACTACT126TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
RR4AW36TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EV568348.1:287-306
AACTGTGGAGTGTCTAAGAGGGAGACTACT287TGCAGAGAGGCAAGTTTCAAGGTCTGTAAAAGATGAAGCAGAGCTCATTG
RS1A438TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EW714796.1:98-117
AACTGTGGAGTGTCTAAGAGGGAGACTACT98TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAAAAGCAGAGCTCATTT
BR031828 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-014E07 5', mRNA sequence.
EX047184.1:79-98
AACTGTGGAGTGTCTAAGAGGGAGACTACT79TGCAGAGAGGCAAGTTTCAAGGTTTGTAAAAGATGAAGCGGATCTCATTA
BR031865 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-015A03 5', mRNA sequence.
EX047221.1:85-104
AACTGTGGAGTGTCTAAGAGGGAGACTACT85TGCAGAGAGGCAAGTTTCAAGGTTTGTAAAAGATGAAGCGGATCTCATTA
BR035249 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-062C05 5', mRNA sequence.
EX050605.1:88-107
AACTGTGGAGTGTCTAAGAGGGAGACTACT88TGCAGAGAGGCAAGTTTCAAGGTTTGTAAAAGATGAAGCGGATCTCATTA
BR035868 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-070D05 5', mRNA sequence.
EX051224.1:85-104
AACTGTGGAGTGTCTAAGAGGGAGACTACT85TGCAGAGAGGCAAGTTTCAAGGTTTGTAAAAGATGAAGCGGATCTCATTA
BR039592 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-143D12 5', mRNA sequence.
EX054948.1:79-98
AACTGTGGAGTGTCTAAGAGGGAGACTACT79TGCAGAGAGGCAAGTTTCAAGGTTTGTAAAAGATGAAGCGGATCTCATTA
BR121288 root cDNA library KHRT Brassica rapa subsp. pekinensis cDNA clone KHRT-84G10 5', mRNA sequence.
EX137458.1:310-329
AACTGTGGAGTGTCTAAGAGGGAGACTACT310TGCAGAGAGGCAAGTTTCAAGGTTTGTAAAAGATGAAGCGGATCTCATTA
RS2DJ16TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY938374.1:128-147
AACTGTGGAGTGTCTAAGAGGGAGACTACT128TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAAAAGCAGAGCTCATTT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_37304.
FX725488.1:205-224
AACTGTGGAGTGTCTAAGAGGGAGACTACT205TGCAGAGAGGCAAGTTTCAAGGTTTGTAAAAGATGAAGCGGATCTCATTA
Brassica rapa subsp. pekinensis GSS, clone KBrH059H18, end read, primer SP6.
AJ859439.1:104-123
AACTGTGGAGTCTCTAAGAGGGAGACTACT104TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Arabidopsis thaliana T-DNA flanking sequence GK-406C05-017977.
BX287920.1:152-171
AACTGTGGAGTGTTTAAGAGGAAGATTACT152TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAAGCAGAGCTTATTA
Wiscseq_DsLox489-492F14.1 Arabidopsis thaliana TDNA insertion lines - TDNA_seq Arabidopsis thaliana genomic clone WiscDsLox489-492F14, genomic survey sequence.
KO453140.1:46-65
AACTGTGGAGGGTTTAAGAGGAAGATTACT46TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAAGCAGAGCTTATTA
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress).
BX819610.1:531-550
AACTGTGGAGTGTTTAAGAGGAAGATTACT531TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAAGCAGAGCTTATTA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH015L23, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC232555.1:16153-16172
AACTGTGGAGTGTCTAAGAGGGAGACTACT16153TGCAGAGAGGCAAGTTTCAAGGTTCTGCTAAAGAAGAAGCAGAGCTCATT
Camelina hispida cultivar hispida voucher DAO 902780 chromosome 4.
CP094634.1:6905903-6905922
AACTGTGGAGTGTTTAAGAGGGAGACTACT6905903TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAGGCAGAGATTATTA
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:8739229-8739248
AACTGTGGAGTGTCTAAGAGGGAGACTACT8739229TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Brassica napus cultivar Xiang5A chromosome 17.
CP123892.1:4341613-4341632
AACTGTGGAGTGTCTAAGAGGGAGACTACT4341613TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:66701465-66701484
AACTGTGGAGTGTCTAAGAGGGAGACTACT66701465TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Camelina sativa cultivar CO46 chromosome 5.
CP131554.1:5972411-5972430
AACTGTGGAATGTTTAAGAGGGAGACTACT5972411TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAAGCAGAGATTATTA
Camelina sativa cultivar Joelle chromosome 5.
CP145269.1:6385599-6385618
AACTGTGGAATGTTTAAGAGGGAGACTACT6385599TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAAGCAGAGATTATTA
Camelina sativa cultivar CO46 chromosome 5.
CP146040.1:5842492-5842511
AACTGTGGAATGTTTAAGAGGGAGACTACT5842492TGCAGAGAGGCAAGTTTCAAGATCTGCAAAAGAAGAAGCAGAGATTATTA
Brassica napus cultivar Xiang5A chromosome 5.
CP151900.1:4341617-4341636
AACTGTGGAGTGTCTAAGAGGGAGACTACT4341617TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Brassica napus cultivar Xiang5A chromosome 14.
CP151909.1:8739222-8739241
AACTGTGGAGTGTCTAAGAGGGAGACTACT8739222TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome A03.
CP163463.1:7963061-7963080
AACTGTGGAGTGTCTAAGAGGAAGACTACT7963061TGCAGAGAGGCAAGTTTCAAGGTCTGCAAAAGAAGAAGCAGAGCTCATTA
Eutrema japonicum cultivar Magic isolate CNU_PCGL_DJ_WASABI_2024 chromosome B03.
CP163470.1:7049265-7049284
AACTGTGGAGTGTCTAAGAGGAAGACTACT7049265TGCAGAGAGGCAAGTTTCAAGGTCTGCAAAAGAAGAAGCAGAGCTCATTG
Brassica napus genome assembly, chromosome: A05.
HG994359.1:4292383-4292402
AACTGTGGAGTGTCTAAGAGGGAGACTACT4292383TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Brassica napus genome assembly, chromosome: C04.
HG994368.1:8558048-8558067
AACTGTGGAGTGTCTAAGAGGGAGACTACT8558048TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGATCATTA
Brassica rapa genome, scaffold: A05.
LR031570.1:10238657-10238676
AACTGTGGAGTGTCTAAGAGGGAGACTACT10238657TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:8179486-8179505
AACTGTGGAGTGTCTAAGAGGGAGACTACT8179486TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Raphanus sativus genome assembly, chromosome: 2.
LR778311.1:10761830-10761849
AACTGTGGAGTGTCTAAGAGGGAGACTACT10761830TGCAGAGAGGCAAGTTTCAAGGTCTGTAAAAGATGAAGCAGAGCTCATTG
Brassica rapa genome assembly, chromosome: A05.
LS974621.2:4320336-4320355
AACTGTGGAGTGTCTAAGAGGGAGACTACT4320336TGCAGAGAGGCAAGTTTCAAGGTCTGCTAAAGAAGAAGCAGAGCTCATTA
Thlaspi arvense genome assembly, chromosome: 4.
OU466860.2:4777869-4777888
AACTGTGGAGTGTCTAAGAGGGAGACTCCT4777869TGCAGAGAGGCAAGTTTCAAGGTCTGTAAAAGAAGAAGCAGAGCTCATTA
Lepidium didymum genome assembly, chromosome: 1.
OY986991.1:5053768-5053787
AACTGTGGAGTCTCTAAGAGGGAGACTACT5053768TGCAGAGAGGCAAGTTTCAAGGTCTGTAAAAGAAGAAGCAGAGCTTATTA
Blennius ocellaris genome assembly, chromosome: 2.
OY730202.1:22013965-22013984
TTGCTCAACATTCTGCCTTTAGCCACCTCC22013965TGCAGAGAGGCAAGTTTCAAACTGACAACTGAGCATCTTACTGCGGACAT
Chionomys nivalis genome assembly, chromosome: 19.
OX465467.1:27684369-27684388
ATATCAAGTACTTGCTCCATCTGCTAGTGA27684369TTGAAACTTGCCTCTCTGCATTAAGTTAACATGTTTACTTACATTTGTAG
RR4AW36JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
EV573099.1:820-839
CAATGAGCTCTGCTTCATCTTTTACAGACC820TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
RS1A438JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EW718947.1:550-569
AAATGAGCTCTGCTTTTTCTTTTGCAGATC550TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
TSA: Chorispora bungeana CK_30337 mRNA sequence.
KA018404.1:374-393
TAATGAGCTCAGCTTCTTCTTTTACAGACC374TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTAAGACACTCCACAGTT
TSA: Chorispora bungeana CK_30338 mRNA sequence.
KA018405.1:374-393
TAATGAGCTCAGCTTCTTCTTTTACAGACC374TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTAAGACACTCCACAGTT
TSA: Chorispora bungeana T_51725 mRNA sequence.
KA088555.1:158-177
TAATGAGCTCAGCTTCTTCTTTTACAGACC158TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTAAGACACTCCACAGTT
BOGQU58TR BOGQ Brassica oleracea genomic clone BOGQU58, genomic survey sequence.
BH497541.1:54-73
GAATGAGCTCTGCTTCTTCTTTAGTAGACC54TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Brassica napus GSS, clone JBnB143H11, end read, primer SACL2(forward).
CU933997.1:291-310
TAATGAGGTCTGCTTCATCTTTTACAGACC291TTGAAACTTGCCTCTCTGCAAGCAGTCTCCCTCTTAGACACTCCACAGTT
Brassica napus GSS, clone JBnB017P06, end read, primer SACR2(reverse).
CU946530.1:212-231
TAATGAGCTCTGCTTCTTCTTTATCAAACC212TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAAACACTCCACAGTT
KBrH016L14R KBrH, Brassica rapa HindIII BAC library Brassica rapa subsp. pekinensis genomic clone KBrH016L14, genomic survey sequence.
DX889416.1:41-60
TAATGAGGTCTGCTTCATCTTTTACAGACC41TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
BOT01-110B9TR BOT01 Brassica oleracea genomic clone BOT01-110B9, genomic survey sequence.
FI752911.1:324-343
TAATGAGCTCTGCTTCTTCTTTAGCAGACC324TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Brassica rapa subsp. pekinensis DNA, chromosome: Linkage group A5, BAC clone: KBrS005M06.
AP011509.1:115918-115937
TAATGAGCTCTGCTTCTTCTTTAGCAGACC115918TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Brassica rapa subsp. pekinensis clone KBrB096A21, complete sequence.
CU695272.1:15578-15597
GTAATGAGATCCGCTTCATCTTTTACAAAC15578TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence.
AC005896.3:32677-32696
TAATAAGCTCTGCTTCTTCTTTTGCAGATC32677TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana chromosome 2.
CP002685.1:15663463-15663482
TAATAAGCTCTGCTTCTTCTTTTGCAGATC15663463TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana chromosome 2.
CP076439.1:18671724-18671743
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18671724TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana ecotype 9470 chromosome 2 sequence.
CP086730.1:16730833-16730852
TAATAAGCTCTGCTTCTTCTTTTGCAGATC16730833TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana ecotype 9412 chromosome 2 sequence.
CP086735.1:16461121-16461140
TAATAAGCTCTGCTTCTTCTTTTGCAGATC16461121TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana ecotype 6024 chromosome 2 sequence.
CP086740.1:16867769-16867788
TAATAAGCTCTGCTTCTTCTTTTGCAGATC16867769TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana ecotype 6021 chromosome 2 sequence.
CP086745.1:15582938-15582957
TAATAAGCTCTGCTTCTTCTTTTGCAGATC15582938TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana ecotype 5856 chromosome 2 sequence.
CP086750.1:16205112-16205131
TAATAAGCTCTGCTTCTTCTTTTGCAGATC16205112TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana ecotype 1254 chromosome 2 sequence.
CP086755.1:16456677-16456696
TAATAAGCTCTGCTTCTTCTTTTGCAGATC16456677TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana chromosome 2.
CP087127.2:18827775-18827794
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18827775TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana isolate t2t_salk_col chromosome 2.
CP096025.1:18175701-18175720
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18175701TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Brassica napus genome assembly, chromosome: A04.
HG994358.1:19711298-19711317
TAATGAGGTCTGCTTCATCTTTTACAGACC19711298TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACGCTACAGTT
Brassica napus genome assembly, chromosome: C03.
HG994367.1:12558901-12558920
TAATGAGCTCTGCTTCTTCTTTAGCAGACC12558901TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Brassica napus genome assembly, chromosome: C04.
HG994368.1:61658373-61658392
TAATGAGGTCTGCTTCATCTTTTACAGACC61658373TTGAAACTTGCCTCTCTGCAAGCAGTCTCCCTCTTAGACACTCCACAGTT
Brassica rapa genome, scaffold: A04.
LR031576.1:18315322-18315341
TAATGAGATCCGCTTCATCTTTTACAAACC18315322TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:12671261-12671280
TAATGAGCTCTGCTTCTTCTTTAGCAGACC12671261TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:61394694-61394713
TAATGAGGTCTGCTTCATCTTTTACAGACC61394694TTGAAACTTGCCTCTCTGCAAGCAGTCTCCCTCTTAGACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
LR215053.1:15210307-15210326
TAATAAGCTCTGCTTCTTCTTTTGCAGATC15210307TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
LR699751.1:15442656-15442675
TAATAAGCTCTGCTTCTTCTTTTGCAGATC15442656TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
LR699756.1:15165519-15165538
TAATAAGCTCTGCTTCTTCTTTTGCAGATC15165519TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
LR699761.1:15987658-15987677
TAATAAGCTCTGCTTCTTCTTTTGCAGATC15987658TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
LR699766.1:15529909-15529928
TAATAAGCTCTGCTTCTTCTTTTGCAGATC15529909TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
LR881467.1:17749235-17749254
TAATAAGCTCTGCTTCTTCTTTTGCAGATC17749235TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis arenosa genome assembly, chromosome: 4.
LR999454.1:12490918-12490937
TGATAAGCTCTGCTTCTTCTTTTGCAGATC12490918TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:18737878-18737897
TAATGAGATCCGCTTCATCTTTTACAAACC18737878TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OW119597.1:17943036-17943055
TAATAAGCTCTGCTTCTTCTTTTGCAGATC17943036TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291430.1:18290250-18290269
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18290250TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291437.1:19281367-19281386
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19281367TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291451.1:18748849-18748868
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18748849TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291456.1:19342516-19342535
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19342516TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291461.1:19455893-19455912
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19455893TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291466.1:19665738-19665757
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19665738TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291482.1:17819850-17819869
TAATAAGCTCTGCTTCTTCTTTTGCAGATC17819850TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291487.1:19021392-19021411
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19021392TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291509.1:18686861-18686880
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18686861TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX291514.1:19186298-19186317
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19186298TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461136.1:18762996-18763015
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18762996TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461141.1:16744502-16744521
TAATAAGCTCTGCTTCTTCTTTTGCAGATC16744502TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461146.1:18152649-18152668
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18152649TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461151.1:18755563-18755582
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18755563TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461156.1:16989631-16989650
TAATAAGCTCTGCTTCTTCTTTTGCAGATC16989631TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461161.1:18995097-18995116
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18995097TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461166.1:19350431-19350450
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19350431TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461171.1:18131930-18131949
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18131930TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461176.1:18793815-18793834
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18793815TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461181.1:20622222-20622241
TAATAAGCTCTGCTTCTTCTTTTGCAGATC20622222TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OX461186.1:18272337-18272356
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18272337TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Raphanus sativus genome assembly, chromosome: 4.
OY743210.1:42888671-42888690
CAATGAGCTCTGCTTCATCTTTTACAGACC42888671TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Lepidium didymum genome assembly, chromosome: 5.
OY986995.1:16981462-16981481
TAATAAGCTCTGCTTCTTCTTTGACAGACC16981462TTGAAACTTGCCTCTCTGCAAGTAGTCTTCCTCTTAGAGACTCCACTGTT
Cardamine chenopodiifolia genome assembly, chromosome: 28.
OZ000486.1:15328681-15328700
TAATAAGCTCTGCTTCTTCTTTTGCAAACC15328681TTGAAACTTGCCTCTCTGCAAGTAGTCTTCCTCTTAGACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OZ059910.1:18201292-18201311
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18201292TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OZ059915.1:18688718-18688737
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18688718TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana genome assembly, chromosome: 2.
OZ059920.1:18007305-18007324
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18007305TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Brassica nigra genome assembly, chromosome: 6.
OZ173176.1:39885095-39885114
TAATGAACTCTGCTTGCTCTTTTGCAGACC39885095TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Arabidopsis halleri genome assembly, chromosome: 4.
OZ185639.1:19754936-19754955
TGATAAGCTCTGCTTCTTCTTTTGCAGATC19754936TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCCACAGTT
Capsella bursa-pastoris isolate wt-msu genome assembly, chromosome: O6.
OZ193830.1:10644755-10644774
TAATAAGCTCAGCTTCTTCTTTAGCAGATC10644755TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana strain Col-0 genome assembly, chromosome: 2.
OZ204932.1:18775697-18775716
TAATAAGCTCTGCTTCTTCTTTTGCAGATC18775697TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Arabidopsis thaliana strain Can-0 genome assembly, chromosome: 2.
OZ205036.1:19367700-19367719
TAATAAGCTCTGCTTCTTCTTTTGCAGATC19367700TTGAAACTTGCCTCTCTGCAAGTAATCTTCCTCTTAAACACTCCACAGTT
Matthiola sinuata genome assembly, chromosome: 1.
OZ209981.1:61658807-61658826
TAATGAGCTCTGCTTCTTCTTTTACAGACC61658807TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAGACACTCTACAGTT
Capsella orientalis genome assembly, chromosome: O6.
OZ210527.1:10644755-10644774
TAATAAGCTCAGCTTCTTCTTTAGCAGATC10644755TTGAAACTTGCCTCTCTGCAAGTAGTCTCCCTCTTAAACACTCCACAGTT
Rhinatrema bivittatum genome assembly, chromosome: 5.
LR584391.1:68085488-68085507
GGACAGTTTGCTTCCTGTGATTTCCTTCAG68085488TTGAAACTTGCCTCTCTGCAGGCTAGCAGCTCCTTATGACTCCTGTTCCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCAGAGAGGCAAGTTTCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCAGAGAGGCAAGTTTCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.043 | 1.034 | search_plus_done; http://172.18.8.135:50800/match?q=TGCAGAGAGGCAAGTTTCAA&k=0&no_gap=0&offset=0&limit=50
1.512 | 0.469 | search_minus_done; http://172.18.8.135:50800/match?q=TTGAAACTTGCCTCTCTGCA&k=0&no_gap=0&offset=0&limit=11
1.560 | 0.048 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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