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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:01:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:36382805-36382828
GGATTGGATTGGAATAGGCGACTTTGAGTG36382805TGCATTACTTTCCACTGACGTTACTTGTTCCAGGCTTTCAGCAATATCCGTAAT
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:25813133-25813156
GGATTGGATGGGAATAGGCTACTTTGAGTG25813133TGCATTACTTTCCACTGACGTTACTTGTTCCAGGCTTTCAGCAATATCTGTAAT
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:4244186-4244209
ATTACGGATATTGCTGAAAGCCTGGAACAA4244186GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:4495891-4495914
ATTACGGATATTTCTGAAAGCCTGGAACAA4495891GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:37299694-37299717
ATTACGAATATTGCTGAAAGCCTGGAACAA37299694GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:4587592-4587615
ATTACGGATATTTCTGAAAGCCTGGAACAA4587592GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:4403248-4403271
ATTACGGATATTGCTGAAAGCCTGGAACAA4403248GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:4527673-4527696
ATTACGGATATTTCTGAAAGCCTGGAACAA4527673GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus domestica genome assembly, chromosome: 13.
OU696689.1:4620113-4620136
ATTACGAATATTGCTGAAAGCCTGGAACAA4620113GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus domestica genome assembly, chromosome: 13.
OU744554.1:4514800-4514823
ATTACGGATATTTCTGAAAGCCTGGAACAA4514800GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus domestica genome assembly, chromosome: 13.
OU744965.1:4536496-4536519
ATTACGAATATTGCTGAAAGCCTGGAACAA4536496GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus domestica genome assembly, chromosome: 13.
OU745003.1:4405336-4405359
ATTACGGATATTTCTGAAAGCCTGGAACAA4405336GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:4538948-4538971
ATTACGGATATTTCTGAAAGCCTGGAACAA4538948GTAACGTCAGTGGAAAGTAATGCACACTCAAAGTCGCCTATTCCAATCCAATCC
Glyphotaelius pellucidus genome assembly, chromosome: 5.
OW386541.1:10310349-10310372
TTGTACCTTTCTATCAATAAATAAAATAAC10310349GTAACGTCAGTGGAAAGTAATGCAATGTTGTACTTTTGTCGACATTGCAATTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCATTACTTTCCACTGACGTTAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCATTACTTTCCACTGACGTTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.340 | 0.331 | search_plus_done; http://172.18.8.135:50400/match?q=TGCATTACTTTCCACTGACGTTAC&k=0&no_gap=0&offset=0&limit=50
0.454 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=GTAACGTCAGTGGAAAGTAATGCA&k=0&no_gap=0&offset=0&limit=48
0.462 | 0.008 | cgi_end;

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