GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 02:29:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Eutrigla gurnardus genome assembly, chromosome: 19.
OY741282.1:13847958-13847977
ACTCATAATCAGCACCTTGCATTTCAGGTC13847958TGCATTCCTCTTCTGCACTGAGTTTTGGTTTGGCTTACCGGGACAAACAG
Lotus japonicus cDNA, clone: LjFL3-028-BD08, 5'-end sequence.
FS327563.1:81-100
ACCTTATCTTCCACTCTCTTGATTGGTTCT81TGCATTCCTCTTCTGCACTGTGTGGAGCCAAATTGCAAAACAAGAACAAC
Lotus japonicus cDNA, clone: LjFL3-036-DC03, 5'-end sequence.
FS330334.1:158-177
ACCTTATCTTCCACTCTCTTGATTGGTTCT158TGCATTCCTCTTCTGCACTGTGTGGAGCCAAATTGCAAAACAAGAACAAC
Lotus japonicus cDNA, clone: LjFL3-036-DC03, HTC.
AK339035.1:158-177
ACCTTATCTTCCACTCTCTTGATTGGTTCT158TGCATTCCTCTTCTGCACTGTGTGGAGCCAAATTGCAAAACAAGAACAAC
Lotus japonicus genomic DNA, chromosome 3, clone: LjB25F18, BM1487.
AP008109.2:34134-34153
ACCTTATCTTCCACTCTCTTGATTGGTTCT34134TGCATTCCTCTTCTGCACTGTGTGGAGCCAAATTGCAAAACAAGAACAAC
Onychomys leucogaster genome assembly, chromosome: 5.
OX460375.1:69169541-69169560
TCTGTGAGGCCTAGCTGGCTGGAAATAAAA69169541CAGTGCAGAAGAGGAATGCAGGTGCTACCACAATCGAGAGAACGAGGACA
Onychomys leucogaster genome assembly, chromosome: 5.
OX460422.1:69590003-69590022
TCTGTGAGGCCTAGCTAGCTGGAAATAAAA69590003CAGTGCAGAAGAGGAATGCAGGTGCTACCACAATCGAGAGAACGAGGACA
Thalassophryne amazonica genome assembly, chromosome: 1.
LR722966.1:7859470-7859489
TTCGACAGTGTGAAGAAAATTCTGGTGCCT7859470CAGTGCAGAAGAGGAATGCATCTCCATAATTACGCTAAACGGATCCGTGC
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:5511482-5511501
GTTGTTCTTGTTTTGCAATTTGGCTCCACA5511482CAGTGCAGAAGAGGAATGCAAGAACCAATCAAGAGAGTGGAAGATAAGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCATTCCTCTTCTGCACTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCATTCCTCTTCTGCACTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.320 | 0.312 | search_plus_done; http://172.18.8.135:50400/match?q=TGCATTCCTCTTCTGCACTG&k=0&no_gap=0&offset=0&limit=50
0.344 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=CAGTGCAGAAGAGGAATGCA&k=0&no_gap=0&offset=0&limit=45
0.347 | 0.003 | cgi_end;

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