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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-04 11:44:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

000906AAFB003812HT (AAFB) Royal Gala apple skin peel, tree-ripened fruit 150 DAFB Malus domestica cDNA clone AAFB003812, mRNA sequence.
CN861124.1:447-466
CACTTTAGTTGGCAAACTAGGCGTCAAATA447TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACATCC
TSA: Pyrus x bretschneideri Unigene21162_XinShao mRNA sequence.
JR615309.1:796-815
CAGTTTAGTTGGCGAACTAGGCGTGAAATA796TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACGTCC
Linaria vulgaris genome assembly, chromosome: 4.
OX415252.1:101752900-101752919
TAGTGTGGTGAAGGTGGGAAAGACATTGGA101752900TGCATTGGGATTGCATGTGGATTGCACAATTTTGAACACGCACTCTCTGA
Isothecium myosuroides genome assembly, chromosome: 2.
OX637288.1:23896786-23896805
TGAATGCTCTTTGTCTTTGTTATACTGGTC23896786TGCATTGGGATTGCATGTGGGAGCACTTCTGGCACGATCGAAAGGAACTC
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:13395756-13395775
CAGTTCAGTTGGCGAACTAGGCGTGAAATA13395756TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTGCGTCC
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:9815332-9815351
CAGTTTAGTTGGCGAACTAGGCGTGAAATA9815332TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACGTCC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:31001815-31001834
GGATGTACTTCCTCATGAAGGAAGGCAAGC31001815CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACCG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:32588070-32588089
GGATGTACTTCCTCATGAAGGAAGGCAAGC32588070CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:30021479-30021498
GGATGTACTTCCTCATGAAGGAAGGCAAGC30021479CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:30508923-30508942
GGATGTACTTCCTCATGAAGGAAGGCAAGC30508923CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:32034529-32034548
GGATGTACTTCCTCATGAAGGAAGGCAAGC32034529CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:29244436-29244455
GGATGTACTTCCTCATGAAGGAAGGCAAGC29244436CCACATGCAATCCCAATGCATATTTGACGCCTAGTTCGCCAACTAAACTG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:31781457-31781476
GGATGTACTTCCTCATGAAGGAAGGCAAGC31781457CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU696686.1:31810502-31810521
GGATGTACTTCCTCATGAAGGAAGGCAAGC31810502CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:31960743-31960762
GGATGTACTTCCTCATGAAGGAAGGCAAGC31960743CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:32712409-32712428
GGATGTACTTCCTCATGAAGGAAGGCAAGC32712409CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:31784785-31784804
GGATGTACTTCCTCATGAAGGAAGGCAAGC31784785CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:30119563-30119582
GGATGTACTTCCTCATGAAGGAAGGCAAGC30119563CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:21430116-21430135
GGATGTACTTCCTCATGAAGGAAGGCAAGC21430116CCACATGCAATCCCAATGCATATTTGACGCCTAGTTCGCCAACTAAACTG
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:140753781-140753800
TAATACTCCTAATTCTGAATCATGATGTAC140753781CCACATGCAATCCCAATGCATATCTAGATCTAGCGTGGCCACATTCGAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCATTGGGATTGCATGTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCATTGGGATTGCATGTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.216 | 0.207 | search_plus_done; http://172.18.8.135:50400/match?q=TGCATTGGGATTGCATGTGG&k=0&no_gap=0&offset=0&limit=50
0.320 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=CCACATGCAATCCCAATGCA&k=0&no_gap=0&offset=0&limit=44
0.329 | 0.009 | cgi_end;

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