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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 23:00:46, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

000906AAFB003812HT (AAFB) Royal Gala apple skin peel, tree-ripened fruit 150 DAFB Malus domestica cDNA clone AAFB003812, mRNA sequence.
CN861124.1:447-466
CACTTTAGTTGGCAAACTAGGCGTCAAATA447TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACATCC
TSA: Pyrus x bretschneideri Unigene21162_XinShao mRNA sequence.
JR615309.1:796-815
CAGTTTAGTTGGCGAACTAGGCGTGAAATA796TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACGTCC
Malus domestica cultivar Red Fuji chromosome 10.
CP147802.1:13064904-13064923
CACTTTAGTTGGCAAACTAGGCGTCAAATA13064904TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACATCC
Malus domestica cultivar Red Fuji chromosome 10.
CP147811.1:12077129-12077148
CACTTTAGTTGGCAAACTAGGCGTCAAATA12077129TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACATCC
Linaria vulgaris genome assembly, chromosome: 4.
OX415252.1:101752900-101752919
TAGTGTGGTGAAGGTGGGAAAGACATTGGA101752900TGCATTGGGATTGCATGTGGATTGCACAATTTTGAACACGCACTCTCTGA
Isothecium myosuroides genome assembly, chromosome: 2.
OX637288.1:23896786-23896805
TGAATGCTCTTTGTCTTTGTTATACTGGTC23896786TGCATTGGGATTGCATGTGGGAGCACTTCTGGCACGATCGAAAGGAACTC
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:13395756-13395775
CAGTTCAGTTGGCGAACTAGGCGTGAAATA13395756TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTGCGTCC
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:9815332-9815351
CAGTTTAGTTGGCGAACTAGGCGTGAAATA9815332TGCATTGGGATTGCATGTGGGCTTGCCTTCCTTCATGAGGAAGTACGTCC
Prunus brigantina genome assembly, chromosome: 4.
OZ184545.1:9507856-9507875
CAGTTCAGTTGGCGAACTCGGCGTGAAATA9507856TGCATTGGGATTGCATGTGGTCTTGCCTTCCTTCATGAGGAAGTACGTCC
Acomys minous genome assembly, chromosome: 5.
OZ186479.1:14205407-14205426
GTCCAGCGTTGAGATCCAGCATCATCTTAT14205407CCACATGCAATCCCAATGCATTGCATCCCTGCTAGTGAGCTGAGGAAGCT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:31001815-31001834
GGATGTACTTCCTCATGAAGGAAGGCAAGC31001815CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACCG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:32588070-32588089
GGATGTACTTCCTCATGAAGGAAGGCAAGC32588070CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:30021479-30021498
GGATGTACTTCCTCATGAAGGAAGGCAAGC30021479CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:30508923-30508942
GGATGTACTTCCTCATGAAGGAAGGCAAGC30508923CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:32034529-32034548
GGATGTACTTCCTCATGAAGGAAGGCAAGC32034529CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:29244436-29244455
GGATGTACTTCCTCATGAAGGAAGGCAAGC29244436CCACATGCAATCCCAATGCATATTTGACGCCTAGTTCGCCAACTAAACTG
Malus ioensis cultivar PI590015 chromosome 5.
CP154728.1:34155333-34155352
GGACGTACTTCCTCATGAAGGAAGGCAAGC34155333CCACATGCAATCCCAATGCATATTTCACGCCTAGTTCGCCAATTAAACTG
Malus ioensis cultivar PI590015 chromosome 10.
CP154733.1:28847472-28847491
GGATGTACTTCCTCATGAAGGAAGGCAAGC28847472CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus ioensis cultivar PI590015 chromosome 5.
CP154745.1:35143276-35143295
GGACGTACTTCCTCATGAAGGAAGGCAAGC35143276CCACATGCAATCCCAATGCATATTTCACGCCTAGTTCGCCAATTAAACTG
Malus ioensis cultivar PI590015 chromosome 10.
CP154750.1:32892171-32892190
GGATGTACTTCCTCATGAAGGAAGGCAAGC32892171CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus coronaria cultivar PI590014 chromosome 5.
CP154762.1:35809276-35809295
GGACGTACTTCCTCATGAAGGAAGGCAAGC35809276CCACATGCAATCCCAATGCATATTTCACGCCTAGTTCGCCAATTAAACTG
Malus coronaria cultivar PI590014 chromosome 10.
CP154767.1:33788698-33788717
GGATGTACTTCCTCATGAAGGAAGGCAAGC33788698CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Malus coronaria cultivar PI590014 chromosome 5.
CP154779.1:35299298-35299317
GGACGTACTTCCTCATGAAGGAAGGCAAGC35299298CCACATGCAATCCCAATGCATATTTCACGCCTAGTTCGCCAATTAAACTG
Malus coronaria cultivar PI590014 chromosome 10.
CP154784.1:33861189-33861208
GGATGTACTTCCTCATGAAGGAAGGCAAGC33861189CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Chaenomeles sinensis isolate sampleA chromosome 01.
CP162364.1:26182345-26182364
GGATGTACTTCCTCATGAAGGAAGGCAAGC26182345CCACATGCAATCCCAATGCATATTTGACGCCTAGTTCGCCAACTAAACTG
Chaenomeles sinensis isolate sampleA chromosome 02.
CP162365.1:28125137-28125156
GGACGTACTTCCTCATGAAGGAAGGCAAGC28125137CCACATGCAATCCCAATGCATATTTCACGCCTAGTTCGCCAACTAAACTG
Malus domestica cultivar WA 38 chromosome 10B.
CP165693.1:32121523-32121542
GGATGTACTTCCTCATGAAGGAAGGCAAGC32121523CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica cultivar WA 38 chromosome 10A.
CP165710.1:31178249-31178268
GGATGTACTTCCTCATGAAGGAAGGCAAGC31178249CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica cultivar Golden Delicious chromosome 10.
CP168774.1:31445263-31445282
GGATGTACTTCCTCATGAAGGAAGGCAAGC31445263CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica cultivar Golden Delicious chromosome 10.
CP168791.1:31654492-31654511
GGATGTACTTCCTCATGAAGGAAGGCAAGC31654492CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:31781457-31781476
GGATGTACTTCCTCATGAAGGAAGGCAAGC31781457CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU696686.1:31810502-31810521
GGATGTACTTCCTCATGAAGGAAGGCAAGC31810502CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:31960743-31960762
GGATGTACTTCCTCATGAAGGAAGGCAAGC31960743CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:32712409-32712428
GGATGTACTTCCTCATGAAGGAAGGCAAGC32712409CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:31784785-31784804
GGATGTACTTCCTCATGAAGGAAGGCAAGC31784785CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAAGTG
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:30119563-30119582
GGATGTACTTCCTCATGAAGGAAGGCAAGC30119563CCACATGCAATCCCAATGCATATTTGACGCCTAGTTTGCCAACTAAACTG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:21430116-21430135
GGATGTACTTCCTCATGAAGGAAGGCAAGC21430116CCACATGCAATCCCAATGCATATTTGACGCCTAGTTCGCCAACTAAACTG
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:140753781-140753800
TAATACTCCTAATTCTGAATCATGATGTAC140753781CCACATGCAATCCCAATGCATATCTAGATCTAGCGTGGCCACATTCGAAT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 2.
OZ077125.1:94028169-94028188
AAGTAACATAAAAAGGTGAGTCTAGCCAAT94028169CCACATGCAATCCCAATGCAAGCACACAAGATGATGCTATGAATGAATGC
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 2.
OZ077125.1:129314404-129314423
AAGTAACATAAAAAGGGGTATCCAACCAAT129314404CCACATGCAATCCCAATGCAAGTACACAAGATGATGCTATGAATGAATGT
Helwingia omeiensis isolate Yeshanghua genome assembly, chromosome: 12.
OZ077135.1:18419254-18419273
AAGTAACAAAGAAAGGGGTATCTAACCCAT18419254CCACATGCAATCCCAATGCAAGCACACAAGATGATGCTATGAATGAATGC
Lampetra planeri genome assembly, chromosome: 39.
OZ078362.2:3035808-3035827
TGGGTTGTCTCCGGGCACTCCGGCTTCCTC3035808CCACATGCAATCCCAATGCAGGACTCTCCTGAAAAAGTTCCCGGAGAATG
Lampetra fluviatilis genome assembly, chromosome: 39.
OZ078607.2:2903821-2903840
TGGGTTGTCTCCGGGCACTCCGGCTTCCTC2903821CCACATGCAATCCCAATGCAGGACTCTCCTGAAAAAGTTCCCGGAGAATG
Triturus cristatus genome assembly, chromosome: 7.
OZ123748.1:908405155-908405174
TCTTTTACTTGAACCACATTTAACCCACTC908405155CCACATGCAATCCCAATGCATGTGCTATATATTATTTTGGATTTTCAGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCATTGGGATTGCATGTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCATTGGGATTGCATGTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.249 | 0.240 | search_plus_done; http://172.18.8.135:50800/match?q=TGCATTGGGATTGCATGTGG&k=0&no_gap=0&offset=0&limit=50
0.377 | 0.129 | search_minus_done; http://172.18.8.135:50800/match?q=CCACATGCAATCCCAATGCA&k=0&no_gap=0&offset=0&limit=41
0.401 | 0.023 | cgi_end;

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