GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 20:39:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Podarcis lilfordi genome assembly, chromosome: 13.
OX395138.1:40379506-40379525
TGGATTTGGAAGCTCCCATCTTACTCCCTC40379506TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Podarcis cretensis genome assembly, chromosome: 13.
OX638161.1:43749071-43749090
TAGATTTGGAAGCTCCCATCTTACTCCCTC43749071TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Podarcis cretensis genome assembly, chromosome: 13.
OX638161.1:43772713-43772732
TGGATTTGGAAGCTCCCATCTTACTCCCTC43772713TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Podarcis cretensis genome assembly, chromosome: 13.
OX638161.1:43801958-43801977
TGGATTTGGAAGCTCCCATCTTACTCCCTC43801958TGCCATTCCTCTGTGCTTGAATTGGGATGAATGTCTGATGTGCAAAGCAT
Brassica napus genome assembly, chromosome: C02.
HG994366.1:21863161-21863180
CCCTAAAAGCCGAATTCCTGCAAGAAACCG21863161TGCCATTCCTCTGTGCTTGAACTCCAGAGCAAGTGAATCACCGCCGATAT
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:23098391-23098410
CCCTAAAAGCCGAATTCCTGCAAGAAACCG23098391TGCCATTCCTCTGTGCTTGAACTCCAGAGCAAGTGAATCACCGCCGATAT
Aquila chrysaetos chrysaetos genome assembly, chromosome: Z.
LR606180.1:78481937-78481956
GTGGAAGCAGTGTTAGAGCTGAAGGCCCAG78481937TCAAGCACAGAGGAATGGCAGGAGCCTCTAATAGCAGGGTTCTGGCAGAA
Accipiter gentilis genome assembly, chromosome: Z.
OV839360.1:79950660-79950679
GTGGAAGTAGGGTTAAAGCTGAAGGCCCAG79950660TCAAGCACAGAGGAATGGCAGGAGCCTCTAATTGCAGGGTTCTGGCAGAA
Chroicocephalus ridibundus genome assembly, chromosome: Z.
OZ001737.1:77399628-77399647
CAGAAGGTGGAAGCAGGGCTGAACGCCAAG77399628TCAAGCACAGAGGAATGGCAGGAGCCTCTAATAGTAGCGTTCCGTCAGAG
Larus fuscus genome assembly, chromosome: Z.
OZ010757.1:76578722-76578741
CAGAAGGTGGAAGCAGGGCTGAAGGCCAAG76578722TCAAGCACAGAGGAATGGCAGGAGCCTCTAATAGTAGCGTTCCGTCCGAG
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:45176499-45176518
ATATCGGCGGTGATTCACTTGCTCTGGAGT45176499TCAAGCACAGAGGAATGGCACGGTTTCTTGCAGGAATTCGGCTTTTAGGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCCATTCCTCTGTGCTTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCATTCCTCTGTGCTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.137 | 0.128 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCATTCCTCTGTGCTTGA&k=0&no_gap=0&offset=0&limit=50
0.182 | 0.045 | search_minus_done; http://172.18.8.135:50400/match?q=TCAAGCACAGAGGAATGGCA&k=0&no_gap=0&offset=0&limit=44
0.185 | 0.003 | cgi_end;

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