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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:22:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys percivali genome assembly, chromosome: 6.
OU015747.1:121842003-121842022
TCTCTCTCTCTTCCTTCCTCTCTCCCCCCC121842003TGCCCCATTTCTTCAACTTCTCCCCTGACTGTGCACACTTGTTAGGCTTC
Phalacrocorax aristotelis genome assembly, chromosome: 4.
OX451225.1:5899011-5899030
ACAGGTTCTTTTCCCCAAATGCACCTTCCT5899011TGCCCCATTTCTTCAACTTCCTTTCCTGGTCTCCTCATCGTAGCCTCATT
TSA: Capsicum annuum MGMT_Contig3722, mRNA sequence.
JW053966.1:3341-3360
TAACACTAGAATCGTCTTTACCACCTCTGC3341TGCCCCATTTCTTCAACTTCTGGATTAAGTTGGGCTTTTTACTGAAACTA
GT_DBa058M19.R GT_DBa Glycine tomentella genomic 3', genomic survey sequence.
HN735009.1:630-649
ATGAAAGAGCACTTGAATCATCTTTGCTTT630TGCCCCATTTCTTCAACTTCTGGATTAAACTAGTTTTCTTGCTAACACTA
Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:7027615-7027634
TAACACTAGAATCGTCTTTACCACCTCTGC7027615TGCCCCATTTCTTCAACTTCTGGATTAAGTTGGGCTTTTTACTGAAACTA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 11.
CP124709.1:4483955-4483974
TAAGACTAGAATCGTCTTTACCACCTCTGC4483955TGCCCCATTTCTTCAACTTCTGGATTAAGTTGGGCTTTTTACTGAAACTA
Microcos paniculata chromosome 1b.
CP131447.1:60332709-60332728
ATAAAAGGGCACTCGAATCATCTTTGCTCT60332709TGCCCCATTTCTTCAACTTCTGGATTAAGCTAGTTTTCTTAATGAGACTG
Microcos paniculata chromosome 1a.
CP131456.1:60359149-60359168
ATAAAAGGGCACTCGAATCATCTTTGCTCT60359149TGCCCCATTTCTTCAACTTCTGGATTAAGCTAGTTTTCTTAATGAGACTG
Solanum dulcamara genome assembly, chromosome: 2.
OX359253.1:3459746-3459765
TAATGCTAGAATCGTCTCTAACACCTCTGC3459746TGCCCCATTTCTTCAACTTCTGGATTAAGTTGGGCTTCTTACTGAAACTA
Phalacrocorax carbo genome assembly, chromosome: 4.
OY997605.1:78518738-78518757
AATGAGGCTACGATGAGGAGACCAGGAAAA78518738GAAGTTGAAGAAATGGGGCAAGGAAGGTGCATTTGGGGAAAAGAACCTGT
KS09024E04 KS09 Capsicum annuum cDNA, mRNA sequence.
CA514429.1:311-330
TAGTTTCAGTAAAAAGCCCAACTTAATCCA311GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
EST731274 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAU92 5' end, mRNA sequence.
CK247637.1:101-120
TAGTTTCAGTAAAAAGCCCAACTTAATCCA101GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
EST731900 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCAZ63 5' end, mRNA sequence.
CK248263.1:65-84
TAGTTTCAGTAAAAAGCCCAACTTAATCCA65GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
EST732097 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCB111 5' end, mRNA sequence.
CK248460.1:629-648
TAGTTTCAGTAAAAAGCCCAACTTAATCCA629GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
TSA: Capsicum annuum MGMT_Contig2950, mRNA sequence.
JW053194.1:1821-1840
TAGTTTCAGTAAAAAGCCCAACTTAATCCA1821GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
Carpinus viminea chromosome 8.
CP054674.1:394234-394253
CAGTCTCAGTAAGAAACCTAGCTTAATCCA394234GAAGTTGAAGAAATGGGGCAAAAGCAGAGATGATTTGACTGCTCTTGCAT
Solanum tuberosum cultivar Solyntus chromosome 5.
CP055238.1:1992446-1992465
TAGTTTCAGTAAAAAGCCCAACTTAATCCA1992446GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:270438927-270438946
TAGTTTCAGTAAAAAGCCCAACTTAATCCA270438927GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
Corylus americana cultivar Rush chromosome 6.
CP125819.1:320133-320152
CAGTCTCAGTAAGAAACCTAGCTTAATCCA320133GAAGTTGAAGAAATGGGGCAAAAGCAAAGATGATTTGACTGCTCTTGCAT
Corylus americana cultivar Winkler chromosome 6.
CP125830.1:324928-324947
CAGTCTCAGTAAGAAACCTAGCTTAATCCA324928GAAGTTGAAGAAATGGGGCAAAAGCAAAGATGATTTGACTGCTCTTGCAT
Solanum verrucosum cultivar 11H23 chromosome 5.
CP133616.1:1847064-1847083
TAGTTTCAGTAAAAAGCCCAACTTAATCCA1847064GAAGTTGAAGAAATGGGGCAGCAGAGGTGGTAAAGACGATTCTAGTGTTA
Corylus avellana genome assembly, chromosome: ca6.
LR899428.1:326641-326660
CAGTCTCAGTAAGAAACCTAGCTTAATCCA326641GAAGTTGAAGAAATGGGGCAAAAGCAAAGATGATTTGACTGCTCTTGCAT
Amphipoea lucens genome assembly, chromosome: 18.
OX382373.1:17252801-17252820
AAATTGGTGAGAAGAAGCACAACATCAAGA17252801GAAGTTGAAGAAATGGGGCAAGGTTTTTATCCAGGAGGACAAATCAGGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCCCCATTTCTTCAACTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCCCATTTCTTCAACTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.247 | 0.238 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCCCATTTCTTCAACTTC&k=0&no_gap=0&offset=0&limit=50
0.537 | 0.290 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGTTGAAGAAATGGGGCA&k=0&no_gap=0&offset=0&limit=41
0.546 | 0.009 | cgi_end;

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