GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 10:06:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Bos mutus isolate yakQH1 chromosome X.
CP027098.1:17883827-17883846
GAGGTACGGGATATAGGATGTGTGCACTGT17883827TGCCCTGGGAGTGATCACTACGCAGATACTGTCAACCTACCATTTTGGAA
Bos taurus genome assembly, chromosome: 21.
LR962752.1:3204837-3204856
GAGGTACGGGATATAGGATGTGTGCACTGT3204837TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos gaurus x Bos taurus genome assembly, chromosome: X.
OX258984.1:20444254-20444273
GAGGTACGGGATATAGGATGTGTGCACTGT20444254TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos taurus genome assembly, chromosome: BtaX.
OY997258.1:20629937-20629956
GAGGTACGGGATATAGGATGTGTGCACTGT20629937TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos taurus clone CH240-403C12, WORKING DRAFT SEQUENCE, 14 unordered pieces.
AC221309.1:143388-143407
GAGGTACGGGATATAGGATGTGTGCACTGT143388TGCCCTGGGAGTGATCACTACACAGATACTGTCAACCTACCATTTTGGAA
Bos taurus strain mammals genome assembly, chromosome: X.
OX344689.1:29805005-29805024
TTCCAAAATGGTAGGTTGACAGTATCTGTG29805005TAGTGATCACTCCCAGGGCAACAGTGCACACATCCTATATCCCGTACCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TGCCCTGGGAGTGATCACTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCCTGGGAGTGATCACTA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCCTGGGAGTGATCACTA&k=0&no_gap=0&offset=0&limit=50
0.134 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=TAGTGATCACTCCCAGGGCA&k=0&no_gap=0&offset=0&limit=45
0.134 | 0.001 | cgi_end;

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