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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-07 23:42:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Plant transformation vector p9-Dao-FLPi-HcrVf2, complete sequence.
KM232746.1:8813-8832
ATCTTAGTTCTAACCAATTCACTGGTGCAT8813TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus floribunda hcrVf1 gene.
AJ297739.1:2270-2289
ATCTTGGTTCTAACCAATTCACTGGTGCAT2270TGCCTATTGTTCCCACCTCATTAGTTTGGCTAGATCTTTCCAATTCATCA
Malus floribunda hcrVf2 gene.
AJ297740.1:1825-1844
ATCTTAGTTCTAACCAATTCACTGGTGCAT1825TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus floribunda hcrVf3 gene.
AJ297741.1:1635-1654
ATCTTAGTTCTAACCAATTCACTGGTGCAT1635TGCCTATTGTTCCCACCTCATTATTTTTTCTAGATCTTTCCAGGTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:39107714-39107733
ATCTTAGTTCTAACCGTTTCACTGGTGCAT39107714TGCCTATTGTTCCCACCTCATTGCAATTGTGGTGGCTAGATCTTTCCAAT
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:39398097-39398116
ATCTTAGTTCTAACAATTTCACTGGTGCAT39398097TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:39407396-39407415
ATCTTAGTTCTAACCAATTCACTGGTGCAT39407396TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:39444442-39444461
ATCTTGGTTCTAACCAATTCATTGGTGCAT39444442TGCCTATTGTTCCCACCTCATTATTGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:39470339-39470358
ATCTTAGTTCTAACCATTTCACTGGTGCAT39470339TGCCTATTGTTCCCACCTCATTAGATTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141910.1:39504755-39504774
ATCTTAGTTCTAACCAATTCACTGGTGCAT39504755TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:28687348-28687367
ATCTTAGTTCTAACTATTTCACTGGTGCAT28687348TGCCTATTGTTCCCACCTCATTAGATTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:28973685-28973704
ATCTTAGTTCTAACCAATTCACTGGTGCAT28973685TGCCTATTGTTCCCACCTCATTATAATGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:28985087-28985106
ATCTTAGTTCTAACCATTTCACTGGTGCAT28985087TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Flame chromosome 1.
CP141927.1:29007626-29007645
ATCTTAGTTCTAACCAATTCACTGGTGCAT29007626TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:26819792-26819811
ATCTTAGTTCTAACCGTTTCACTGGTGCAT26819792TGCCTATTGTTCCCACCTCATTGCAATTGTGGTGGCTAGATCTTTCCAAT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:27228330-27228349
ATCTTGGTTCTAACCAATTCACTGGTGCAT27228330TGCCTATTGTTCCCACCTCATTATTTTGGCTATATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141953.1:27301771-27301790
ATCTTAGTTCTAACCAATTCACTGGTGCAT27301771TGCCTATTGTTCCCACCTCATTATGGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:28498688-28498707
ATCTTAGTTCTAACCGTTTCACTGGTGCAT28498688TGCCTATTGTTCCCACCTCATTGCAATTGTGGTGGCTAGATCTTTCCAAT
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:28782076-28782095
ATCTTGGTTCTAACCAATTCACTGGTGCAT28782076TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:28813054-28813073
ATCTTAGTTCTAACCAATTCACTGGTGCAT28813054TGCCTATTGTTCCCACCTCATTATGGTGGCTAGATCTTTCCGATTCATCA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:28848142-28848161
ATCTTAGTCTTAACCAATTCACTGGTGCAT28848142TGCCTATTGTTCCCACCTCATTAGATTGGCTAGATCTTTCCAATTCATTA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:28957917-28957936
ATCTTAGTTCTAACCAATTCACTGGTGCAT28957917TGCCTATTGTTCCCACCTCATTAGATTGGCTAGATCTTTCCCATTCATCA
Malus hybrid cultivar cultivar Royalty chromosome 1.
CP141970.1:28987749-28987768
ATCTTAATTCTAACCAATTCACTGGTGCAT28987749TGCCTATTGTTCCCACCTCATTATTTTTTTTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:28263172-28263191
ATCTTAGTTCTAACCGTTTCACTGGTGCAT28263172TGCCTATTGTTCCCACCTCATTGCAATTGTGGTGGCTAGATCTTTCCAAT
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:28552014-28552033
ATCTTAGTTCTAACCAATTCACTGGTGCAT28552014TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:28583735-28583754
ATCTTAGTTCTAACCAATTCACTGGTGCAT28583735TGCCTATTGTTCCCACCTCATTAGAATGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143358.1:28595125-28595144
ATCTTAGTTCTAACCATTTCACTGGTGCAT28595125TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:3292996-3293015
ATCTTGGTTCTAACAAATTCACTGGTGCAT3292996TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:26902410-26902429
ATCTTAGTTCTAACCATTCCACTGGTGCAT26902410TGCCTATTGTTCCCACCTCATTATCTTTTTTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27285096-27285115
ATCTTGGTTCTAACCAATTCACTGGTGCAT27285096TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27310554-27310573
ATCTTGGTTCTAACCAATTCATTGGTGCAT27310554TGCCTATTGTTCCCACCTCATTATTGTGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27371628-27371647
ATCTTAGTTCTAACCAATTCACTGGTGCAT27371628TGCCTATTGTTCCCACCTCATTAGAATGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27375775-27375794
ATCTTGGTTCTAACCAATTCACTGGTGCAT27375775TGCCTATTGTTCCCACCTCATTAGAATGGCTAGATCTTTCCAATTCATCA
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:27386185-27386204
ATCTTAGTTCTAACCATTTCACTGGTGCAT27386185TGCCTATTGTTCCCACCTCATTAATTTGGCTAGATCTTTCCAATTCATCA
Malus floribunda clone HB03s HB03p gene, complete cds.
EU794449.1:2241-2260
ATCTTGGTTCTAACCAATTCACTGGTGCAT2241TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus floribunda clone M18S-3As M18S-3Ap gene, complete cds.
EU794450.1:2351-2370
ATCTTAGTTCTAACCATTTCACTGGTGCAT2351TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus floribunda clone M18S-5As M18-S5p gene, complete cds.
EU794454.1:2052-2071
ATCTTGGTTCTAACCAATTCATTGGTGCAT2052TGCCTATTGTTCCCACCTCATTATTGTGGCTAGATCTTTCCAATTCATCA
Malus floribunda clone M18S-5Bs Vf apple scab resistance protein HcrVf2-like gene, complete sequence.
EU794455.1:2470-2489
ATCTTGGTTCTAACCAATTCACTGGTGCAT2470TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus floribunda clone M18S-3Cs M18S-3Cp gene, complete cds.
EU794458.1:2135-2154
ATCTTAGTTCTAACCAATTCACTGGTGCAT2135TGCCTATTGTTCCCACCTCATTATATTGGCTAGATCTTTCCAATTCATCA
Malus floribunda clone HB09s HB09p gene, complete cds.
EU794461.1:1833-1852
ATCTTGGTTCTAACAAATTCACTGGTGCAT1833TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus floribunda clone M18-6Cs HcrVf4 gene, complete cds.
EU794466.1:2241-2260
ATCTTAGTTCTAACCAATTCACTGGTGCAT2241TGCCTATTGTTCCCACCTCATTATTTTTTCTAGATCTTTCCAGGTCATCA
Malus x domestica clone ANO9 receptor-like protein gene, partial cds.
JN006141.1:1700-1719
ATCTTAGTTCTAACCAATTCACTGGTGCAT1700TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus x domestica clone ANT4 receptor-like protein gene, partial cds.
JN006142.1:1703-1722
ATCTTGGTTCCAACCAATTCACTGGTGCAT1703TGCCTATTGTTCCCACCTCATTAGATCGGCTTGATCTTTCCAATTCATCA
Malus x domestica clone APO1 receptor-like protein gene, partial cds.
JN006143.1:1700-1719
ATCTTAGTTCTAACCAATTCACTGGTGCAT1700TGCCTATTGTTCCCACCTCATTAATGTGGCCAGATCTTTCCAATTCATCA
Malus x domestica clone APO21 receptor-like protein gene, partial cds.
JN006144.1:1694-1713
ATCTTAGTTCTAACCAATTCACTGGTGCAT1694TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus x domestica clone GAL5 receptor-like protein gene, partial cds.
JN006145.1:1700-1719
ATCTTAGTTCTAACCAATTCACTGGTGCAT1700TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus baccata clone MAB10 receptor-like protein gene, partial cds.
JN006146.1:1706-1725
ATCTTAGTTCTAACCAATTCACTGGTGCAT1706TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus baccata clone MAB12 receptor-like protein gene, partial cds.
JN006147.1:1706-1725
ATCTTAGTTCTAACCAATTCACTGGTGCAT1706TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus micromalus clone MAM13 receptor-like protein gene, partial cds.
JN006148.1:1511-1530
ATCTTAGTTCTAACCAATTCACTGGTGCAT1511TGCCTATTGTTCCCACCTCATTATTTTTTCTAGATCTTTCCAGGTCATCA
Malus micromalus clone MAM16 receptor-like protein gene, partial cds.
JN006149.1:1712-1731
ATCTTAGTTCTAACCAATTCACTGGTGCAT1712TGCCTATTGTTCCCACCTCATTATGGTGGCTAGATCTTTCCGATTCATCA
Malus micromalus clone MAM31 receptor-like protein gene, partial cds.
JN006150.1:1706-1725
ATCTTAGTTCTAACCAATTCACTGGTGCAT1706TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:24906710-24906729
ATCTTAGTTCTAACAATTTCACTGGTGCAT24906710TGCCTATTGTTCCCACCTCATTGTGGTGGCTAGATCTTTCCAATTCATCA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25202932-25202951
ATCTTGGTTCTAACCAATTCACTGGTGCAT25202932TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25227520-25227539
ATCTTGGTTCTAACCAATTCATTGGTGCAT25227520TGCCTATTGTTCCCACCTCATTATTGTGGCTAGATCTTTCCAATTCATCA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25253134-25253153
ATCTTAGTTCTAACCAATTCACTGGTGCAT25253134TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25280322-25280341
CTGAATCTCTCTCACAATTCACTGGTGCAT25280322TGCCTATTGTTCCCACCTCATTAACGTGGCTAGATCTTTCCAATTCATCA
Malus sylvestris genome assembly, chromosome: 1.
OU696503.1:25299243-25299262
ATCTTAGTTCTAACCAATTCACTGGTGCAT25299243TGCCTATTGTTCCCACCTCATTAGAATGGCTAGATCTTTCCAATTCATCA
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:3353912-3353931
ATCTTGGTTCTAACCAATTCACTGGTGCAT3353912TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU696677.1:24983354-24983373
ATCTTAGTTCTAACCGTTTCACTGGTGCAT24983354TGCCTATTGTTCCCACCTCATTGCAATTGTGGTGGCTAGATCTTTCCAAT
Malus domestica genome assembly, chromosome: 1.
OU696677.1:25243624-25243643
ATCTTGGTTCTAACCAATTCACTGGTGCAT25243624TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU696677.1:25282649-25282668
ATCTTGGTTCTAACCAATTCATTGGTGCAT25282649TGCCTATTGTTCCCACCTCATTATTGTGGCTAGATCTTTCCAATTTATCA
Malus domestica genome assembly, chromosome: 1.
OU696677.1:25312298-25312317
ATCTTAGTTCTAACCAATTCACTGGTGCAT25312298TGCCTATTGTTCCCACCTCATTAGATTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 6.
OU696682.1:3510665-3510684
ATCTTGGTTCTAACCAATTCACTGGTGCAT3510665TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744542.1:28713719-28713738
ATCTTAGTTCTAACTATTTCACTGGTGCAT28713719TGCCTATTGTTCCCACCTCATTAGATTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29004707-29004726
ATCTTGGTTCTAACCAATTCACTGGTGCAT29004707TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29029152-29029171
ATCTTGGTTCTAACCAATTCATTGGTGCAT29029152TGCCTATTGTTCCCACCTCATTATTGTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744542.1:29071822-29071841
ATCTTAGTTCTAACCATTTCACTGGTGCAT29071822TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 6.
OU744547.1:3280157-3280176
ATCTTGGTTCTAACCAATTCACTGGTGCAT3280157TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744953.1:28167393-28167412
ATCTTAGTTCTAACCGTTTCACTGGTGCAT28167393TGCCTATTGTTCCCACCTCATTGCAATTGTGGTGGCTAGATCTTTCCAAT
Malus domestica genome assembly, chromosome: 1.
OU744953.1:28456259-28456278
ATCTTAGTTCTAACCAATTCACTGGTGCAT28456259TGCCTATTGTTCCCACCTCATTAATGTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744953.1:28487980-28487999
ATCTTAGTTCTAACCAATTCACTGGTGCAT28487980TGCCTATTGTTCCCACCTCATTAGAATGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744953.1:28499370-28499389
ATCTTAGTTCTAACCATTTCACTGGTGCAT28499370TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 6.
OU744958.1:3405246-3405265
ATCTTGGTTCTAACCAATTCACTGGTGCAT3405246TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744991.1:25187277-25187296
ATCTTAGTTCTAACTATTTCACTGGTGCAT25187277TGCCTATTGTTCCCACCTCATTAGATTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744991.1:25478269-25478288
ATCTTGGTTCTAACCAATTCACTGGTGCAT25478269TGCCTATTGTTCCCACCTCAATAATGTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744991.1:25502714-25502733
ATCTTGGTTCTAACCAATTCATTGGTGCAT25502714TGCCTATTGTTCCCACCTCATTATTGTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 1.
OU744991.1:25545383-25545402
ATCTTAGTTCTAACCATTTCACTGGTGCAT25545383TGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCAATTCATCA
Malus domestica genome assembly, chromosome: 6.
OU744996.1:3269736-3269755
ATCTTGGTTCTAACCAATTCACTGGTGCAT3269736TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:3057310-3057329
ATCTTGGTTCTAACCGATTCAATGGTGCAT3057310TGCCTATTGTTCCCACCTCATTAGCCTGGCTAGATCTTTCCAATTCATCA
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:5443597-5443616
ATCTTGGTTCTAACCAATTCACTGGTGCAT5443597TGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCA
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:5483836-5483855
ATCTTAGTTCTAACCATTTCACTGGTGCAT5483836TGCCTATTGTTCCCACCTCATTGTGGTGGCTAGATCTTTCCAATTCATCA
Pyrus communis genome assembly, chromosome: 16.
OY757083.1:4225591-4225610
ATCTTGGTTCTAACCAATTCACTGGTGCAT4225591TGCCTATTGTTCCCACCTCATTATATTTGCTAGATCTTTCCAATTCATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCCTATTGTTCCCACCTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCTATTGTTCCCACCTCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.234 | 0.226 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCTATTGTTCCCACCTCA&k=0&no_gap=0&offset=0&limit=50
0.385 | 0.151 | search_minus_done; http://172.18.8.135:50400/match?q=TGAGGTGGGAACAATAGGCA&k=0&no_gap=0&offset=0&limit=0
0.385 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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