GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:31:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Eucalyptus camaldulensis mRNA, clone: Stem_001_000170C12, 3'-EST.
FY825712.1:391-414
ACCAAATAGAGGCAGATAGTTCGGCAGCCT391ATGGAGAAGGGTTTAGGTCAGGCAACCGGGCCGTGCTCAAGTACGGCCTCCGAA
EG_Ba001C13.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM680930.1:62-85
ACCAAATAGAGGCAGATAGTTCGGCAGCCT62ATGGAGAAGGGTTTAGGTCAGGCAACCGGGCTGTGCTCAAGTACGGCCTCCGAA
EG_Ba119M17.R EG_Ba Eucalyptus grandis genomic 3', genomic survey sequence.
JM711709.1:262-285
ACCAAATAGAGGCAGATAGTTCGGCAGCCT262ATGGAGAAGGGTTTAGGTCAGGCAACCGGGCTGTGCTCAAGTACGGCCTCCGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCCTGACCTAAACCCTTCTCCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCTGACCTAAACCCTTCTCCAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.310 | 0.301 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCTGACCTAAACCCTTCTCCAT&k=0&no_gap=0&offset=0&limit=50
0.581 | 0.271 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGAGAAGGGTTTAGGTCAGGCA&k=0&no_gap=0&offset=0&limit=50
0.583 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).